AMCG00000060


Basic Information

Item Value
gene id AMCG00000060
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 1619082 ~ 1642652 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000060
CAGCCGCGGCCAGTGGCAGGGTTCCGTGGGACAGTTCGGTACGCCTCTATCAATGCACACAAGAACAAGGAAATGGGTCGACACGATGACCTCTGGTCCCTGTTCTACATGCTGGTGGAGTTCATTGTGGGCCAGTTGCCCTGGAGGAAGATCAAAGATAAGGAGCAAGTTGGGAAACTGAAGGAAACCTACGATCACCGGATCATGCTGAAACACCTTCCCCCAGAGTTCACCATCTTTCTGGATCACATCTGTAGCCTGGACTACTTCAAGAAACCCGACTACCAGCTGCTGATGTCCGTGTTTGAGAACAGCATGAGAACATTTGGTGTGTTGGAGAATGACCCCTACGACTGGGAGAGGAGCGGCATCGATGGCACTCTGACCATCAACACAAACTGCACCACGCCCCAGCACCACACCCGCCTGACCCCAGCAAACTTCATTATGGCCAATGCTTCCCTGGTGCCAGGAGACCTGATGAGGGAGAACACTGATGAGGTGCTACAGGACGAGCAGCTGAGCGATGGCGAGAACAACTGTCCGGAGAGGGTTGTCCCTGGCTCGCCAGGCCTGCTGCCCCAACAGCAGGCTATCGATGTCTGGGAGGTTAACCACTACCGCAACCAGGTCGCATTGCCCGCCTGGAAGGCAGCCACAGAGGAGGAGCACAGTCCGAACCAGGGGAACCAAAGTCCGTATGCTGGGCCCAGCCTGGGGTCACCTGCCAAGGTCCGCTCAGAGACGGCCCAGTCCGAGCTCCACTCTCCCCTGCTAAGGAAGATGCGGCCCTTCTATAGTTCTGACCTGGAGAGCATTGGGAAGCAGAACGGTACAGCCCTGGACAACGAGGGTGACCAGTCTGGGATGGCCGGCAGTGGCGGCGGAAGGCGCATTGAGCGTGTGTGGCACTACGATGAGGAATTCCTGCCGGGGGGATCCAAGCCAAGTTCCCCTGCATCACCAGAACAAGGCGAGGGGGCAGCCAGCAGTGGCTTCTTAGCCCTGAACCTCAGCTCCGGGCGGCAGGATGTGGACTCCCGTGAGTGGGTTGTGGTGGACCGAGAACAGGACCTTCAAGACTACCTGGAGGGCAGTGGGGGCCAGGGGGCCAAAGCCACTAGCAGCCCTTCAGAGGAAGAGCCAGAGGTCCTGCAACTGGTTGAGGAGATTCCCAGCACAGATCCACTTGGCTCCAGTCCCCCTAGGGATCAGAGGGAGGGTGCTGGGCCTGAGCAGGGGCTGAAGGTGGAGCATCTAGAGCTCAGCGTGGGGCATCTTGGGCAGCTGCCTCCAGTTACTCCAACCAGCCCAGCAGAAGCCCTTGCTGAGGGTGCCCTCACACAGCTCCCCACCTCTCCTCCTTCACTTCCCGAGCCCTGCCGGATCACCAGCCCCCTTCTCCGTTCCCCGAGCCCGCTAgctctcctctccactctctcgGACCCCCTGCACCAGCGAGCGCCCGGCCTGAGACGGAGCCAGTCAGCTGATCACCCCGCCGTCCTCACCCGCTCGCCTGGCCACCGGAAGCTGCCTGCCGTCCCTGGGGGGGCCAAGTACCCCTCAGTCATTCGCATCTCCCGAGCCCAGCTCCAGCAGCTGACTGCTCCCCGGCCCTCGGTGCTGTCCTCTCAGTCTGCCTCTGACAGCGCTCCACAGTGCCTCTTGCTGGAGAGACGGGAGGGAGACTGCCAGCCCATGGACATCACAGCAGACATGTACTCACCGCAGGAGCAGGCAGGAGAGCAAGGTATTTCTGGGTGTGATGGGCCTGAGGAAAGGGCTCTCTCCAAGGCTGCCACCCCCACGGACTCACTGGCAGAAAAGCTGGCCAACGGGGAGGCGGGGCAGAATCCACCCAGCCCTGTGCCGAGCCAGGTGTCCCCACGCCAATCGCCAAGCCTGCAGAAGAGCCCCGTGCTTGCCAATGGCAACCTTTCCCCCAGCGCTGAAAGCTTGGGCGGAAGTGGTGGCGGCACCTTCCCTGAACTCAAAGACCCAGAGGGCAATTCTGGATCCCCCGATCACTCCACAGAGCCACACGGCCGCCCCCTGGAAGACAAGGTTCAGATCCCACCTGGGAATGGTGAAACTGTGATGGCTTCCACCCCGCTCCCCAGGAAGAACCCAACACGAAGGCTGAGCCGCATCCCAGTGCTGGAGCCAGGGCTGTTGGACTTGCCCCCCCCCGGCTCGGCCAAGGAGAAGCTTCTGCAGAAGAAGGCGCACCACTCCGACCCCACCCACCCTGTCTCAGACAAGCGCCCTCCGACAGGACTGCGTGGGGAGGCTTCCTCGGCCTCCGACCGTTCCCAGGATGATGAGTCGTGCCTGGGCTCCCGCTCAGACCGGCAGGGTGAGGATCCCCTctcactctcctcctcctctggtcCGCTGTCCCGCAAAAGCAAGATCCCCCGACCCGTCCCGGCTCCTGTGTCCATCCCTGTCTCTGATCCACCGACTGGACAGTTCTTCCCACGCCCCCCACCGGGGAAGCCCCCCAGCCGACCAGCTGTGGATGGCAGGTTGCGACGATACCGGATCCGTGCAAGCAGCAGCAGCGACTCGGACCTGTTCTCCTGCTTGGCCCACATTATGCAGAGCGGGGGTGGCGGTAGCTGCGGCCCCAAAATGCGGGGCTCAGTCCAGGGCAAGGGAAGCCCGGGCTCACCACGCTGTGCCAGGATCCCGCCAGGCAGCCCCTCTGCCCCCCACCGCAGCGCCTCTGCCTCCCCCCGTAGCTCCTCTTCCCTGCAGCGCTCTGTCAGCTCCTCCCCTTCCCGCCACGAACACAGAAGTGGAGGGGGCCTAGGTCGCAGCCGGTCGCCTCCCAGCTTCTCCGGCTCTCCACCGCCCCGTCGCGCCTACCCCCAGGAGACCTGCTGCAGCCGACAGGCTCGCTCCGGCTCCTTCCACTCCCCCCGGGGCAAGGCCTGCAGCCGAGAGGGCAAGTGCTCCAGTAAACTCAGCAGATAGTGATGGGGACACACCAAGGCATCCCTGCACCCACAGAGTTTTGATTGCTAGCATTCTGCTCCAGCACACAGGAGCACTAGCACATTCCTCctgcagataaaaaaataaataaaaaatgcatttacagtcacgtaagaaaaaagacaaaaggacGATAAAAAGAAACCCAAAATGTTCTTATGTAGATCACCCCACATTTCTGctcttttccctttttatatatgtttgtgtgtgtgtgtatacagctctggaaaaaattgagaccacttaacatagatttttccagagctgtatgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatacacacacacacacaagagctGTGTTTTTGGC

Function

GO: NA

KEGG:

id description
K08815 TTBK; tau tubulin kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000060 True 3356 mRNA 0.60 10 1619082 1642652

Neighbor

gene id symbol gene type direction distance location
AMCG00000064 NA coding downstream 7871 1585546 ~ 1611211 (-)
AMCG00000059 NA coding downstream 75056 1489471 ~ 1544026 (-)
AMCG00000058 churc1 coding downstream 130993 1484520 ~ 1488089 (-)
AMCG00000062 NA coding downstream 177167 1392809 ~ 1441915 (-)
AMCG00000065 LOC106591853 coding downstream 276729 1303939 ~ 1342353 (-)
AMCG00000061 ttbk2 coding upstream 11673 1654325 ~ 1664847 (-)
AMCG00000063 NA coding upstream 80998 1723650 ~ 1736101 (-)
AMCG00000068 LOC107741856,LOC107666262,LOC108425653,LOC107594708,LOC105898002,LOC105026081 coding upstream 245598 1888250 ~ 1903755 (-)
AMCG00000069 NA coding upstream 710348 2353000 ~ 2354076 (-)
AMCG00000087 pax9,LOC102777290,LOC107666242,LOC107679748,LOC107741874 coding upstream 1165042 2807694 ~ 2819520 (-)
G147588 NA non-coding downstream 15 1613333 ~ 1619067 (-)
G147467 NA non-coding downstream 430039 1188799 ~ 1189043 (-)
G147419 NA non-coding downstream 444780 1172316 ~ 1174302 (-)
G147420 NA non-coding downstream 731203 802811 ~ 887879 (-)
G147368 NA non-coding downstream 878473 739606 ~ 740609 (-)
G147639 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 177709 1820361 ~ 1829348 (-)
G147645 NA non-coding upstream 208271 1850923 ~ 1851379 (-)
G147681 NA non-coding upstream 443706 2086358 ~ 2119964 (-)
G147704 LOC107575789 non-coding upstream 658546 2301198 ~ 2364242 (-)
G147722 NA non-coding upstream 740362 2383014 ~ 2383214 (-)
AMCG00000050 NA other downstream 678247 890112 ~ 940835 (-)
G147324 NA other downstream 1133499 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 1226600 387118 ~ 392482 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other upstream 1909507 3552159 ~ 3558901 (-)
AMCG00000161 NA other upstream 3428815 5071467 ~ 5077246 (-)
G148395 NA other upstream 3696157 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 4361534 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 4403013 6045665 ~ 6067184 (-)

Expression


Co-expression Network