AMCG00000063


Basic Information

Item Value
gene id AMCG00000063
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 1723650 ~ 1736101 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000063
CTAACCTACATAAGTGAAGAAGCTTAGTTTTAAGCGTATTCATATTGCCAATGCAACACTTCAGAAACAGTTTTTCGTACTAAAATTGAAGGTCTGTTTATCTGTGTCGATATAGGTTCATCCATGATGCTTTTATTTGAACAATACCGGTAGAAACCTCCCAGGCGGCGCTCTCATGCTTTTCAAGATCGTATTAGTGAAAAAGAGAGGTCCGAAGTGCTCTGGTCTGTTCATGCCTGGAGGACTGGAGGACTCAGCCGACCAGGAACAAGACGCAGTCGCCTCGCAAAGGGCAGTAGTAGTACCTTCTGCAGATTCGTTATATGATTGTAATAAGTAACACTATAATGTCGACACGCATACAAAAAGTAATCTTGAATTCACGACCCGgaACAAATGCAGAACCAGTTCCAGACAATTTCTGCGTGTTAGATGACGATCTGCAAACAGCTCTGAAGCCGGGAGAGGTTCATGTGCAGACGCTGTATCTCTCCGTAGATCCGTATATGCGCTGTCGAATGAACAAGGACACAGGCGCTGATTATCTGTCCCCCTGGCCACTGTCAGACTGCATAGATGGTGGCGGGGTGGGGGTGGTAGTGGACACCAAGTACGAAGCATTCTCCAGAGGGGACATGGTGACATCTTTCAACTGGCGCTGGAAAACTGAGGACGTTGTGGACACCAGTTCACTGCAAAAGCTGGATCCCAGTCTGGTAGACGGCCACCTGTCGCACTTCCTGGGTGCAGTGGGCATCACTGGCCTCACAGCTCTATTAGGAGTGAGGGAGAAAGGTCATGTGACACCAGGAGCCAATCAGACCATGGTTGTCAGTGGAGCTGCCGGGGCCTGTGGATCTTTAGCTGGCCAGATTGGCAGATTGGATGGCTGTTCCAGGGTGGTGGGGATCTGTGGTACTGATGAGAAATGTAAAGTCTTGGTTTCTGAGCTGGGCTTCACTGAAGCCATCAACTATAAGCAAGAGGATGTGGCCAGCCAGCTGAAGAAGGCCTGTCCTGATGGAGTGGATGTTTACTTTGACAATGTTGGAGGACCAATCAGCGACACTGTGATCTCTcagATGAATGAAGGAAGCCATGTGATCTTGTGTGGCCAGGTCTCACAGTACAATAAAGACCTTCCTTACCCTCCTCCCCTGACTCCCTCTACTCAGGAACTCCTACTCACCAAGAACATCACCAGGGAGCGGTTTACTGTTCTCAACTACATGGATAAATATGAATGCAGCATACTGCAACTCAGCCAGTGGGTAAAAGCAGGGAAATTGAAAGCCTTAGAGACTGTTGTGAAGGGGATACAAAACATGGGAGGTGAGAAATGCTTTTTCCTCTGA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K13949 PTGR2, ZADH1; prostaglandin reductase 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000063 True 1355 mRNA 0.48 8 1723650 1736101

Neighbor

gene id symbol gene type direction distance location
AMCG00000061 ttbk2 coding downstream 58803 1654325 ~ 1664847 (-)
AMCG00000060 NA coding downstream 80998 1619082 ~ 1642652 (-)
AMCG00000064 NA coding downstream 112439 1585546 ~ 1611211 (-)
AMCG00000059 NA coding downstream 179624 1489471 ~ 1544026 (-)
AMCG00000058 churc1 coding downstream 235561 1484520 ~ 1488089 (-)
AMCG00000068 LOC107741856,LOC107666262,LOC108425653,LOC107594708,LOC105898002,LOC105026081 coding upstream 152149 1888250 ~ 1903755 (-)
AMCG00000069 NA coding upstream 616899 2353000 ~ 2354076 (-)
AMCG00000087 pax9,LOC102777290,LOC107666242,LOC107679748,LOC107741874 coding upstream 1071593 2807694 ~ 2819520 (-)
AMCG00000100 rps6ka5 coding upstream 1284316 3020417 ~ 3050033 (-)
AMCG00000095 NA coding upstream 1377018 3113119 ~ 3114141 (-)
G147588 NA non-coding downstream 104583 1613333 ~ 1619067 (-)
G147467 NA non-coding downstream 534607 1188799 ~ 1189043 (-)
G147419 NA non-coding downstream 549348 1172316 ~ 1174302 (-)
G147420 NA non-coding downstream 835771 802811 ~ 887879 (-)
G147368 NA non-coding downstream 983041 739606 ~ 740609 (-)
G147639 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding upstream 84260 1820361 ~ 1829348 (-)
G147645 NA non-coding upstream 114822 1850923 ~ 1851379 (-)
G147681 NA non-coding upstream 350257 2086358 ~ 2119964 (-)
G147704 LOC107575789 non-coding upstream 565097 2301198 ~ 2364242 (-)
G147722 NA non-coding upstream 646913 2383014 ~ 2383214 (-)
AMCG00000050 NA other downstream 782815 890112 ~ 940835 (-)
G147324 NA other downstream 1238067 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 1331168 387118 ~ 392482 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other upstream 1816058 3552159 ~ 3558901 (-)
AMCG00000161 NA other upstream 3335366 5071467 ~ 5077246 (-)
G148395 NA other upstream 3602708 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 4268085 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 4309564 6045665 ~ 6067184 (-)

Expression


Co-expression Network