AMCG00000069


Basic Information

Item Value
gene id AMCG00000069
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 2353000 ~ 2354076 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000069
ATGCTTACTCTCCAGAACAATAAGATGCtgaactacaacaacaacatcctcagtgccccccaccccacaacTGTTCCCTGCACTGGTCCCAACCCCCCCATCGGCACCCCCAATGGGCCCCTGCTGGACAGGAAGGCGGTGGGGACCCCCTCGGTGGGGGCATATCAGCGGCGACACTCTGTTAACTTGACCAGCTCCAAATTCAACCAGAACCAGTTCATCAACAGCCTAAAGATGGAGTCATTGTCGACCGGGGGAGTTGGCAGCAGCAACGGCAGCAGCAACAAGGAGAACCGCTTCCGTGACCGCTCGTACTCCGAGACCGGGGACCGGCTGCTGCAGAAGACCGGCAATGGGAATAGTGGGAACGGCGGGaccaacagcaacaacagcaacaacggCCAGGTGAACTCAAGCCGCTACAAGACTGAATTGTGCCGGCCTTTCGAGGAGAACGGCGCCTGCAAGTATGGCGACAAGTGCCAGTTCGCGCATGGTATCCACGAGCTGCGTAGCCTGAGCCGCCACCCCAAGTACAAGACAGAACTGTGCCGCACTTTCCACACCATCGGCTTCTGCCCCTACGGCCCGCGCTGCCACTTTATCCACAACGCGGAGGAGCGCCGGggtccccctcctctctctgcgTCCAACAAACTAGACCGGCCCCGGCTGCACCACAGCTTCAGCTTCGCTGGTTTTCCCAGCAACAGTGGGCCGCAGGACAGCCCTACCTCAGTCACCCCTCCGCCCATCTTCAGCACCGATGACCTGCCCGAGTGGCACAGCAACCCTTTCACCTACTCCAGCCAGGAGTTGGCCAGCTTTTTCGGGCCCAGCCTGGGAGCTCCCACTGACCCCTCAGCCCCCGCGCCCCCATCGCCTACCACCTTCTTCTTCAGGCCCATGTCTGAGTCCCCTCAGATGTTCGAgtcgccccccacccccccggacTCTCTCTCAGACCAGGAGGGTTACCAGAGCAGTTCGGGCAGCCTAAGTGGGTCGGAGTCACCCATCCTGGACACCAGTCGCCGTCTCCCCATCTTCAGCAGACTGTCTATCTCTGAtgactaa

Function

GO: NA

KEGG:

id description
K18753 ZFP36L; butyrate response factor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000069 True 1077 mRNA 0.61 1 2353000 2354076

Neighbor

gene id symbol gene type direction distance location
AMCG00000068 LOC107741856,LOC107666262,LOC108425653,LOC107594708,LOC105898002,LOC105026081 coding downstream 449245 1888250 ~ 1903755 (-)
AMCG00000063 NA coding downstream 616899 1723650 ~ 1736101 (-)
AMCG00000061 ttbk2 coding downstream 688153 1654325 ~ 1664847 (-)
AMCG00000060 NA coding downstream 710348 1619082 ~ 1642652 (-)
AMCG00000064 NA coding downstream 741789 1585546 ~ 1611211 (-)
AMCG00000087 pax9,LOC102777290,LOC107666242,LOC107679748,LOC107741874 coding upstream 453618 2807694 ~ 2819520 (-)
AMCG00000100 rps6ka5 coding upstream 666341 3020417 ~ 3050033 (-)
AMCG00000095 NA coding upstream 759043 3113119 ~ 3114141 (-)
AMCG00000098 NA coding upstream 781954 3136030 ~ 3177119 (-)
AMCG00000096 NA coding upstream 844803 3198879 ~ 3207812 (-)
G147681 NA non-coding downstream 233036 2086358 ~ 2119964 (-)
G147645 NA non-coding downstream 501621 1850923 ~ 1851379 (-)
G147639 crip1,LOC107600860,LOC103034058,LOC106611282 non-coding downstream 523652 1820361 ~ 1829348 (-)
G147588 NA non-coding downstream 733933 1613333 ~ 1619067 (-)
G147467 NA non-coding downstream 1163957 1188799 ~ 1189043 (-)
G147722 NA non-coding upstream 28938 2383014 ~ 2383214 (-)
G147725 NA non-coding upstream 49322 2403398 ~ 2403618 (-)
G147782 slc25a21 non-coding upstream 436211 2790287 ~ 2793329 (-)
G147823 NA non-coding upstream 656173 3010249 ~ 3014583 (-)
G147921 NA non-coding upstream 953093 3307169 ~ 3308801 (-)
AMCG00000050 NA other downstream 1412165 890112 ~ 940835 (-)
G147324 NA other downstream 1867417 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 1960518 387118 ~ 392482 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other upstream 1198083 3552159 ~ 3558901 (-)
AMCG00000161 NA other upstream 2717391 5071467 ~ 5077246 (-)
G148395 NA other upstream 2984733 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 3650110 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 3691589 6045665 ~ 6067184 (-)

Expression


Co-expression Network