AMCG00000075


Basic Information

Item Value
gene id AMCG00000075
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3076185 ~ 3107875 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000075
ATGTTCGATCCAGTAATAATCCCTGTTCGATTGCTAGTGTCTGGCCTGAGCGAACAGTACGAGCTCGATTGCTTCAGCCTGGCGTCATTGCAAGTTTCTGCTTCTGTTTCCTTCAGATTCAGGAGCGCTCCAATGTTACGTCTGACACCGTTAAGGCCGTCCCTTGCCTCGGTGTTCCGAGAACTGATGCTAGATGGGACACGAAGAGCCAGGGACATCTCAGGAATGGAAGAAGGTTTCAGGATGGCTAGTGTTGTGATACTACATAAGGATCTTGCTGACAGCTTTGAATCTTTCTGCCATGCCAACAGTGGTCCATTGCCTTTATTGTACAGGAGCAAACCAGGAGAGTTCCAATGCCCAAAACTGTCCGGTAGCTCAGACATCAGAACACTTTGCACACAGTATTATAAGTTTGAGAAGGGGGAACTCACAGGCCAGTTGCCCAGTCTCATGGAGAATACTGAGGATCTGTCCAACATGGTGACTTTCTACCTGAAGGCCAGGGTTCCTCTTGGGGACACAGACCAGAAACGGGCTGCTAGCATTTACAAGGGGAAGCTGGAGGCGGTGACACAGGCCACACACCCCGCCCACGACAGCCACGGAGCCCCCATCCACATCGGACACCCAGGCCTGATCGGGGTGGAGGACCTGTCCAGGCCAGACTACGGGGATGCGGTTGAGCTGAGTCAGGGGGACGTGCCGGTGTTCTGGGCCTGTGGGGTGACGGGGCTGGAGGCTGTGAAGAGCTGCAAACCCCCGCTGGCGTTCACCCACTCCCCTGGCTGCATGTTTGTAAGTGACTGTGAAAAGGGGCTGTCAACTGCTGCCCCCAGCCCTGACCCCATAGACATACCCAACGTCTTCTGTATCTCCCAGCAGCCCTTGCACTTCAGCTTGGCCTCATCTGCTGCCGTCAAAAGCATCAGAGCCCTAGAGACGCAGATTGGGGCGGACCCAGGAGAGAGGGGCATCAAAGCCCTCTTTGTCCCGGACGAGCTCCTCAAGGCCTGCCTGTCCCTGTCTCATGCTGCCTCTGTCCTCATCACCACCGGCTTCCCCACCCACTTCAACCACAACCCCCCGGAGGAGACCGACGGGCCCCCCGGGGCCATCGCCATGGCAGCCATGCTCCAGGCCCTGGGCAAACAGGTCGCCATAGTAACTGACCACCGGGCATTAGAGATGAACCGGAGGATCATAGAGGATGCGGTTGAGGAAGGCATTTTGAAGACACCAGTTCCCCTGCTCAGCTTTCAAGACTCTAGTGCAGATTCAGCCTTGAGGTTCCTGTGCTATGATGGTGATCCTAAAACTCCCAGATATGACCACTTGGTGGCAATAGAGCGTGCTGGAATGGCTGCTGATGGGAACTATTACAACATGAGGAAAGTCAACATCAAACACCTGGTGGATCCCATTGATGCTCTGTTCACAGCGGCCAGCACCATCCCGGGAATCAGCACCACAGGGATTGGAGATGGAGGCAATGAGCTGGGCATGGGGAAGGTGAGAGATGCGGTCAGGAGGTACATGCCCCAAGGGGAACTGATTGCTTGTGACGTGGCAGCCGATTTCACCATCATTGCTGGAGTGTCCAACTGGGGGGGCTACGCTGTGGCCTGTGCTCTTCACACCCTCCACTACTGCCCTGTCCACCAGCGCTACCTCAGGAAGGCCGTGGGGCCACCCACTCTCACCCACACCGGCCCTTGGACCTCCGCTCTGCCCTCTGTCAGGAAGGAGGAGAAGCTCCTGGAGATCCTGGTGAAATACGGGATTCGGAGTGGGAAAACCGGGAATCTGGGGATGGAGGTGGACGGCCTGCCTTTCCATGACACTCACTCTTCCATGATCCAGAGCTTGTTGGACATCACCAACCGCCATCCAGCTGACCTGCGTGCTCTAATCCGAGGGAAGAAACTCGACATAAAGAGCACATCTGGAATGGCTGCAGGGTACAAGCAGGCCAATATTGTGATATTGCCCAAGAACCTGGCAAATGATTTTGAAGCTTTCTGCCATGCCAACAGTGGTCCATTGCCTTTACTATACAGAAGCCAGCCAGGAGAGTGGGCATGTCCTAAACTGACTAAAGATTCTGATATAAGAACAGACTGTCcacagtactgtgtgtttgAATGCGGAAACTTCACTGGAAATATTACGTCTCTTATGGCGAACTCCAGAGAGTTTGAGGATATGGTGACCTTCTACCTGGGCTGTAGCTTCAGCTTTGAAGAAATCCTGAAGCAGGCTGGGATTCCAGTCAGGAACTTGGAGCAGAACTGCAATGTCAGCATGTACAAGACCTCGGTGCAATGCTTTGGTGTGGGCAGATTCCAGTGTAACTTGGTGGTGTCCATGAGGCCTGTGCCCGAGGGGAAGCTGGAGGCGGTGACACAGGCCACACACCCTGCCCACGACAGCCACGGAGCCCCCGTCCACATCGGACACCCAGGCCTGATCGGGGTGGAGGACCTGTCCAGGCCAGACTACGGGGATGCGGTTGAGCTAGGGCAGGGGAACGTACCGGTGTTCTGGGCCTGTGGGGTGACGGGGCTGGAGGCTGTGAAGAGCTGCAAGCCCGCTCTGGCGTTCACCCATTCCCCTGGCTGCATGTTCGTCAGTGACTGCGCAGTAGGGGAGTCAGCCGCTGCAGGCAGCCCTGACCCCACAGACACCCCCCACACCTTCTGTATCTCCCAGCAGCCCTTGCACTTCAGCCTGGCCTCGGAGACACAGCTGACCTCAGTGTCCCGGCTGCTTTGTGTTGCAGGAGAGAGGGGCATCAAAGCCCTCTTTGTCCCGGACGAGCTCCTCAAGGCCTGCCTGTCCCTGTCTCATGCTGCCTCTGTCCTCATCACCACCGGCTTCCCCACCCACTTCAACCACAACCCCCCGGAGGAGACCGATGGGCCCCCCGGGGCCATCGCCATGGCAGCCATGCTCCAGGCCCTGGGCAAACAGGTCGCCATAGTAACTGACCACCGGGCATTAGAGATGAACCGGAGGATCATAGAGGATGCGGTTGAGGAAGGTGTTCTTAAGAATCCAGTACCAGTCCTCAGCTTCCAAGGCAAAGGTGAAAGGTCAGCTTTACACTTCCTGTGTCACGAGGGTGACCCTTTTACTCCCAGATATGACCACTTGGTGGCAATAGAGCGTGCTGGTATGGCTGCTGATGGGAACTATTACAACATGAGGAAAGTCAACATCAAACACCTGGTGGATCCCATTGATGCTCTGTTCACAGCGGCCAGCACCATCCCGGGAATCAGCACCACAGGGATTGGAGACGGGGGTAATGAACTTGGGATGGGGAAGGTGAAAGATGAAGTGAGGAAGCATATACCCAATGGTGGCATCATAGCCTGTGATGTTGCAGCAGATTTTGTCATTACAGCTGCTGccttcacaaataaaatgtccCTCTGCCTAGGTGTGTCGAACTGGGGGGGCTATGCTGTGGCCTGTGCTCTTCACACCCTCCACCACTGCCCTGAGAAGAAGCTCCTGGCGATCCTGGTGAAATACGGGATTCGGAGTGGGAAAACCGGGAATCTGGGGATGGAGGTGGATGGGCTGCCTTTCCATGACACTCACTCTTCCATGATCCAGAGCTTGTTGGACATCACCGTACAGCCCCTGGGTACTGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000075 True 3666 mRNA 0.56 25 3076185 3107875

Neighbor

gene id symbol gene type direction distance location
AMCG00000085 nkx2.1,nkx2-1,LOC107679765,LOC107666245,LOC107582966,LOC107578306 coding upstream 216001 2858153 ~ 2860184 (+)
AMCG00000088 NA coding upstream 235150 2839915 ~ 2841035 (+)
AMCG00000086 slc25a21,LOC107679800 coding upstream 285698 2776667 ~ 2790487 (+)
AMCG00000074 LOC106602716,LOC107752725 coding upstream 468194 2572779 ~ 2607991 (+)
AMCG00000071 NA coding upstream 940287 2128584 ~ 2135898 (+)
AMCG00000078 NA coding downstream 295484 3403359 ~ 3416557 (+)
AMCG00000079 NA coding downstream 335638 3443513 ~ 3464306 (+)
AMCG00000081 NA coding downstream 356488 3464363 ~ 3469964 (+)
AMCG00000082 adssl1,pura1 coding downstream 415725 3523600 ~ 3536734 (+)
AMCG00000083 NA coding downstream 430813 3538688 ~ 3541156 (+)
G147814 NA non-coding upstream 39839 3035019 ~ 3036346 (+)
G147809 NA non-coding upstream 50396 3025378 ~ 3025789 (+)
G147808 NA non-coding upstream 52917 3022938 ~ 3023268 (+)
G147807 NA non-coding upstream 54614 3020395 ~ 3021571 (+)
G147806 NA non-coding upstream 60040 3010083 ~ 3016145 (+)
G147842 NA non-coding downstream 28045 3135920 ~ 3139189 (+)
G147856 NA non-coding downstream 108909 3216784 ~ 3295868 (+)
G147994 NA non-coding downstream 522707 3630582 ~ 3631455 (+)
G148010 NA non-coding downstream 580088 3687963 ~ 3688231 (+)
G148036 NA non-coding downstream 620450 3728325 ~ 3759003 (+)
G147726 LOC104962440 other upstream 672213 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 1017415 2036023 ~ 2058770 (+)
G147416 NA other upstream 1959235 1063085 ~ 1116950 (+)
G147311 NA other upstream 2577674 449652 ~ 498511 (+)
AMCG00000032 NA other upstream 2821744 231336 ~ 254441 (+)
AMCG00000094 NA other downstream 582897 3690772 ~ 3699093 (+)
AMCG00000093 srp14,LOC106610862 other downstream 613110 3720985 ~ 3724316 (+)
G148040 NA other downstream 652304 3760179 ~ 3760624 (+)
AMCG00000113 NA other downstream 1004245 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 1980564 5088439 ~ 5161195 (+)

Expression


Co-expression Network