Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000094 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 3690772 ~ 3699093 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000094 | True | 921 | mRNA | 0.52 | 8 | 3690772 | 3699093 |
| TU186234 | False | 233 | TUCP | 0.55 | 3 | 3693109 | 3695802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000090 | NA | coding | upstream | 10055 | 3647806 ~ 3680717 (+) |
| AMCG00000083 | NA | coding | upstream | 149616 | 3538688 ~ 3541156 (+) |
| AMCG00000082 | adssl1,pura1 | coding | upstream | 154038 | 3523600 ~ 3536734 (+) |
| AMCG00000081 | NA | coding | upstream | 220808 | 3464363 ~ 3469964 (+) |
| AMCG00000079 | NA | coding | upstream | 226466 | 3443513 ~ 3464306 (+) |
| AMCG00000089 | NA | coding | downstream | 15571 | 3714664 ~ 3720675 (+) |
| AMCG00000102 | pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 | coding | downstream | 207329 | 3906422 ~ 3915953 (+) |
| AMCG00000104 | NA | coding | downstream | 229379 | 3928472 ~ 3940793 (+) |
| AMCG00000103 | NA | coding | downstream | 258548 | 3957641 ~ 3976423 (+) |
| AMCG00000109 | myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 | coding | downstream | 299085 | 3998178 ~ 4009288 (+) |
| G148010 | NA | non-coding | upstream | 2541 | 3687963 ~ 3688231 (+) |
| G147994 | NA | non-coding | upstream | 59317 | 3630582 ~ 3631455 (+) |
| G147856 | NA | non-coding | upstream | 394904 | 3216784 ~ 3295868 (+) |
| G147842 | NA | non-coding | upstream | 551583 | 3135920 ~ 3139189 (+) |
| G147814 | NA | non-coding | upstream | 654426 | 3035019 ~ 3036346 (+) |
| G148036 | NA | non-coding | downstream | 29232 | 3728325 ~ 3759003 (+) |
| G148075 | NA | non-coding | downstream | 177278 | 3876371 ~ 3879521 (+) |
| G148119 | NA | non-coding | downstream | 312561 | 4011654 ~ 4013403 (+) |
| G148143 | NA | non-coding | downstream | 461762 | 4160855 ~ 4162311 (+) |
| G148146 | mthfd1,LOC106952296,LOC105908326,LOC103136077 | non-coding | downstream | 474344 | 4173437 ~ 4175716 (+) |
| G147726 | LOC104962440 | other | upstream | 1286800 | 2403730 ~ 2403972 (+) |
| AMCG00000073 | mta1,LOC107679789,LOC107666257,LOC107600838 | other | upstream | 1632002 | 2036023 ~ 2058770 (+) |
| G147416 | NA | other | upstream | 2573822 | 1063085 ~ 1116950 (+) |
| G147311 | NA | other | upstream | 3192261 | 449652 ~ 498511 (+) |
| AMCG00000032 | NA | other | upstream | 3436331 | 231336 ~ 254441 (+) |
| AMCG00000093 | srp14,LOC106610862 | other | downstream | 21892 | 3720985 ~ 3724316 (+) |
| G148040 | NA | other | downstream | 61086 | 3760179 ~ 3760624 (+) |
| AMCG00000113 | NA | other | downstream | 413027 | 4112120 ~ 4193033 (+) |
| AMCG00000136 | btbd7 | other | downstream | 1389346 | 5088439 ~ 5161195 (+) |
| AMCG00000145 | NA | other | downstream | 1608097 | 5307190 ~ 5314953 (+) |
