AMCG00000095


Basic Information

Item Value
gene id AMCG00000095
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3113119 ~ 3114141 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000095
ATGTCAAATAAGAGTCTGTGTAACATCAGTTCTGAAATCCACAAATATCTGTTCTCATGGGTGTACATCCTCATCCTGATAATAGGATTTCCTGCCAACCTTTATTCCTTGTACCATGCCTGGCAGCAGCTCAAGGCCAAAAACGAGCTGGGGATCTACTTGGTGAACTTGACTATCTCCGATCTGTTGTACCTAGCCTCCCTACCCCTGTGGCTTCAGTACTTTTTTCTTGGGGACAACTGGGAACACCAAGAGTGGCTGTGTAAGCTGTGTGGGTTCCTCCTCTACGAAAACATCTACATCAGCATCGGCTTCCTCTGCTGCATCTCCATTGACCGTTATTTGGCCGTGGTCCACCCCTTCCACTTCTCCAAGTTCAGGACTATGAAGGCCGCCTCCCTGGCCAGTGCATTCATCTGGCTCAAGGAGATTGCAGTGAGCATGGTGTTCTTCTGGAGCAAAGAGCTGAGCTGGGGCAAGCTTAACCAGTCCATCTGCTTCGAACATTACCCCATGGAGCAATGGGAGCGGCCTGTCAACTACTATCGCTTCTTTATCGGCTTCCTCTTCCCCCTGGGTATCCTTTCTGTGTCTTATTTCCGGGTGTTGAGGGCAGTCAAAAAAAGCGCCGGCACCCAGAACTCCCAGAAAATCCGCATCCAGCACCTGGTCGCGAGCACCATCATCATCTTCCTATTCTGTTTCTCCCCCTATCACATCTTCTTGTTAGTGCGGACTATTTTTGAGGAAAACTGCCCTTTCATCGAGAAAATCTTCAACTACTACCACTTCTCCCTGTTGCTAACCTGTTTCAACTGTGTGGCCGACCCGGCCCTTTACTGTTTTGTCAGCGAGCCTGCCCAGAAAGATATGCTGTGGGCCAAGCGCATTTGTGCTGAGCTTTTCTTCTGCAAGAAGCTGGGCTCCACAAACTCCAGCAATGTCCCCACATGCATTGACAATGGAACTTCTGGAGGGACACTGTTGAACACCAAAGAGAGTGCCATAGATGTTGTGACATGA

Function

GO: NA

KEGG:

id description
K08408 GPR68, OGR1; ovarian cancer G-protein coupled receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000095 True 1023 mRNA 0.49 1 3113119 3114141

Neighbor

gene id symbol gene type direction distance location
AMCG00000100 rps6ka5 coding downstream 63086 3020417 ~ 3050033 (-)
AMCG00000087 pax9,LOC102777290,LOC107666242,LOC107679748,LOC107741874 coding downstream 293599 2807694 ~ 2819520 (-)
AMCG00000069 NA coding downstream 759043 2353000 ~ 2354076 (-)
AMCG00000068 LOC107741856,LOC107666262,LOC108425653,LOC107594708,LOC105898002,LOC105026081 coding downstream 1209364 1888250 ~ 1903755 (-)
AMCG00000063 NA coding downstream 1377018 1723650 ~ 1736101 (-)
AMCG00000098 NA coding upstream 21889 3136030 ~ 3177119 (-)
AMCG00000096 NA coding upstream 84738 3198879 ~ 3207812 (-)
AMCG00000099 ppp4r3a,LOC107726626,LOC107555622,LOC107698404,LOC107601285,LOC107726461,LOC107696138 coding upstream 102571 3216712 ~ 3236877 (-)
AMCG00000101 NA coding upstream 124706 3238847 ~ 3255589 (-)
AMCG00000097 NA coding upstream 154228 3268369 ~ 3287807 (-)
G147823 NA non-coding downstream 98536 3010249 ~ 3014583 (-)
G147782 slc25a21 non-coding downstream 319790 2790287 ~ 2793329 (-)
G147725 NA non-coding downstream 709501 2403398 ~ 2403618 (-)
G147722 NA non-coding downstream 729905 2383014 ~ 2383214 (-)
G147704 LOC107575789 non-coding downstream 748877 2301198 ~ 2364242 (-)
G147921 NA non-coding upstream 193028 3307169 ~ 3308801 (-)
G147941 NA non-coding upstream 349162 3463303 ~ 3463632 (-)
G147997 NA non-coding upstream 528224 3642365 ~ 3642669 (-)
G148011 NA non-coding upstream 573822 3687963 ~ 3688231 (-)
G148041 NA non-coding upstream 646161 3760302 ~ 3760617 (-)
AMCG00000050 NA other downstream 2172284 890112 ~ 940835 (-)
G147324 NA other downstream 2627536 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 2720637 387118 ~ 392482 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other upstream 438018 3552159 ~ 3558901 (-)
AMCG00000161 NA other upstream 1957326 5071467 ~ 5077246 (-)
G148395 NA other upstream 2224668 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 2890045 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 2931524 6045665 ~ 6067184 (-)

Expression


Co-expression Network