AMCG00000104


Basic Information

Item Value
gene id AMCG00000104
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3928472 ~ 3940793 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000104
GTGCTCTTCGGCCCTGGCGgtttgtgtttgaaattaaGATACCGGGAAAAGGAGGAAGCAAGAAGGGTCTTTATTgactattttgaaaatattgtgtttccagcatttatacatttatcttGTTTACAGCGGTTCCTGTGCATCCCGCCATGGCAGAGGGAGGCCCGGAGTGGGAGCTTTGCAAGGAGAACATCCAGCCCCTGAAACACGGCCGAGCCATCTCAGCCCTTCACCAGGCCTTCAGCCAGCAAGAGGGCACCGCCATCCAGCAGCAGAAACAGGCTTTTGAGTCTGAAATCCGGCTGTATAATGGAGATGATCCACTTGATGTGTGGGAAAGGTACATCAAATGGACGCAGGAGACGTACCCACAGGGAGGGAAGGAAAGCAATCTCATCCCCCTGTTAGAGCGAGCTGTCGTGCAGTTCAAAGATGAGAAAATGTACTATAATGACCAACGCTATGTTAACCTCTGGATTAAATatgCTAGCGTTGGCACTGAACCTCTGGACCTCTACAGTTACATGCACGCACAGGGCATTGGGATCCTGACGGCTTCATTTTACATCGCTTGGTCAGAGGAGTATGAAAGACTTGGGAACTTAAAGCAGGCAGACGCCGTCTTTCAAGAAGCCCTCAAGTGCGGGGCAGAACCCCTCGATAAACTGCAGTACTATCACCGGGGCTTTCAGGCACGTGTGTCTCGTCAGGTGATTGCAGACATGGCGTCTGGAGGACAGGATGTGGACAGTCCTGAAGCAGCTCCGCCTCACAGGGCCTCCCTTGTGGATCTCAAGCACAAGGGGAAGAAGAAAGTAGTTGTACCCGTTATCCGAACTGGGGCTTCTGTCAGTCATCATGGTCGAGGACTGAACTTGCAGTTGCCTGGTTCTACACAAGCCAAATCCAACCATCGAATTGCTGTGTTTGACGAAAATCAGGCCGCTCACATGGAGCCCTCCAGGCCGAGGTCAGAGCCCTGGATCGCCCCGCCGATAGGCAGAGCCAAGGAAAACGATCTCATGCCTGAAAAATGGAATAATGTCAAGCTGCCACAGAAATCCAGGGTTGGCTACAGCGCAGAGATGCCACCCAGCAAACCCAACTTCCAACCCTACGTGGAGGACTGTGACGAACTCCCTGCTGTGACGCCGTGCAAGATCAATTCGATGGTGAACAACGTGCTGTCGGCCCGGAAGCCAGGCAGGGAGGAGAGCGTGCTGGCGAGACTGCAGGTCCAGCAGGCTGGCGAGGGGGAGAGGAAGGAGCAGAGCATGTACTGCAAAGACCTGCTGTATGGAGGCACCAGCGAGTTCTGTTTCGAGGAGCTGCGTGCAGAATGCTTTAGGAAAAAGAAGGCCAAGGAAATTGAAGCAGAGGAAGCTGAAATACGTAGAAGACGAGAAGAACTTAGACAAGAAattgaggaaaaacaaagactCCTTCAAGACACTTGCTTGAGAAACCAAGAGTTGGGTTTACCAAATGAGgcTGTTCAAGAATGCAGTAAGGTTCCACATGCCTTGTTGGAAGATGTGATCCATCCACAGACGCGAGACCCCTCAACAGCTGTAGAGCAGTCTAACCCAACAATTGAAATTTATAAAGCATCGGGGTCTGACGTCTATTCCCCACCAAGATCTAACCCCCTAATTGCAAATGGTTTTGACTTTCCAGATGATGTTTTTGTGAGCCCTTCTGCAAAAGAGGACATTGAATTTgaagcaatgtttttaaaatccgATCACAATATGCCAAATACAGAAAAGATGTCTAACAAACCAGCGATCACTCCTTTCACTATTTTTGATGAGAATCCCATTGTTGAAGAGCCACAGAAAGTGGCTCCTCTGCCTTCTTCCCAGGCCACTGCTCGGAAGCCTTTGGCCGCAATCCTGAGACCAGCGGGGGGCGTTCCTCCGAAAGCAGCCACAGACgaatgtGATGACTTGGAAGGAATTGAGCCCCTGAATGAAGATGCCATAGTCAGCAGCTATCGCAATAAAACCCTCTGTCCCAACCCTGACGATACCTGTGACTTTATGAGAGCTGCTCAGCTGGCCTCCACCCCCTTCAGTGGGGGGCTGGGCATGAGGAACAGTCCTGAGCCCGAGATTACAATGACCACGGATCTGTGCAGTGCCGACCTAGATTCCCTGAAATCAGTCACCCCAGTGGTAAAGGATGCGGCAAATGAGGAACCCCCGAGGGTCAAGCAGCTCAGTCCTATCCAGGAAGCTAGTTTGGAAGATGCCCGCTATTCAGTGTCCTCTGGCTCGTCCACATCCTCTTCTGTCAGTGGACAATCCTCTGTGAATGAGATGACCATCGCGGGCAAACTGGAATTGGGTCAATCCCGGACTCTGAGTACACTCGCTGAGCAAACCAGCATCGCCCATTGTGCAGgAACTGGGATTGCCCCGTCAACCATACATGTTAGAAAGCAGTTGTTGGACAAGCTTCCCGAGAgttatttttcacagtttttcagGGAATCGGGACCCCTGCCTACACTGGAGGAAAAATACCAAGTCTGTCTAGgCAATGATACCTATGACATTAAACGGGAGATCATAAGCACTGAAGACTATAACTTGTATTTTGCACAAAGGTCTGTGAATGATAAAATTACAGTTATCAAGGTTGACTTCCAGTGTGTACCCTGGGATTTCTACATTATGACACGCCTGAAGAAGCACCTGGGAGACAAATCCCAAAGCTTTTTTGGTGACCTGTGCCGCTGTTACATGTATGAGGAGGGTTGTGTGACTCTGTTCCAGGGTTTGTACCCACACACACTAATGACAGAGGGCGGCCCTCTCAATTTGGTGGATTTCTCCCATTGCCTGGATTTGGATTTTCAGCCCGAAGTGATGTCAGTCGGTAAACTCCAGATGGCTCAGCGCTTCCTGAAGCAGGGCTTGTTATCGGAGACCTCCACTCCTTATCAGCTGGACTTGTTAGGGATCGCCGATACCGTACATAAGATGTTGGAAGGAAGGAGTATGGAGGTTGTCCGTGAGGGCTCGGAGTGGAGACTTGTTGAGTCGAATGCTGTACCTGTGAATGCAAAATTCAATGATGGCATTTGGTTTAACTTCTTCAAGAAGATTCTTAATCCTGGGGACAGATCCAGTGTGATCATCCTTGCTGAGCTACGGGAGGAATTTAACCGAGAGATGAAGCTCCTGTCCTGCCAGGACTTTGAAATGGAACTGGCATTTTTCTTCTAAAGCTTGTTGAGAAGtgtaacatgcatttaaatagttttctcttctgtatgtttttaataagatgtttttgtattttctattctgctttagtaataaagttttttttttcactactTG

Function

GO: NA

KEGG:

id description
K06637 BUB1B, BUBR1, MAD3L; mitotic checkpoint serine/threonine-protein kinase BUB1 beta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000104 True 3350 mRNA 0.49 23 3928472 3940793

Neighbor

gene id symbol gene type direction distance location
AMCG00000102 pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 coding upstream 12519 3906422 ~ 3915953 (+)
AMCG00000089 NA coding upstream 207797 3714664 ~ 3720675 (+)
AMCG00000090 NA coding upstream 247755 3647806 ~ 3680717 (+)
AMCG00000083 NA coding upstream 387316 3538688 ~ 3541156 (+)
AMCG00000082 adssl1,pura1 coding upstream 391738 3523600 ~ 3536734 (+)
AMCG00000103 NA coding downstream 16848 3957641 ~ 3976423 (+)
AMCG00000109 myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 coding downstream 57385 3998178 ~ 4009288 (+)
AMCG00000108 NA coding downstream 103319 4044112 ~ 4071434 (+)
AMCG00000114 NA coding downstream 190836 4131629 ~ 4135410 (+)
AMCG00000112 NA coding downstream 251041 4191834 ~ 4225082 (+)
G148075 NA non-coding upstream 48951 3876371 ~ 3879521 (+)
G148036 NA non-coding upstream 169469 3728325 ~ 3759003 (+)
G148010 NA non-coding upstream 240241 3687963 ~ 3688231 (+)
G147994 NA non-coding upstream 297017 3630582 ~ 3631455 (+)
G147856 NA non-coding upstream 632604 3216784 ~ 3295868 (+)
G148119 NA non-coding downstream 70861 4011654 ~ 4013403 (+)
G148143 NA non-coding downstream 220062 4160855 ~ 4162311 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding downstream 232644 4173437 ~ 4175716 (+)
G148200 NA non-coding downstream 641518 4582311 ~ 4582551 (+)
G148396 NA non-coding downstream 1413158 5353951 ~ 5354185 (+)
G148040 NA other upstream 167848 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 204156 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 229379 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 1524500 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 1869702 2036023 ~ 2058770 (+)
AMCG00000113 NA other downstream 171327 4112120 ~ 4193033 (+)
AMCG00000136 btbd7 other downstream 1147646 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 1366397 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 1393720 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 1494365 5435158 ~ 5454206 (+)

Expression


Co-expression Network