AMCG00000106


Basic Information

Item Value
gene id AMCG00000106
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3920595 ~ 3928012 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000106
GGGATTGTAAGCATAACTGAACAACATCtccattgtgatttatttttagtgaaAGCGGATTTAAATAACATTGACAATTCTGTCTGATTTAAGTTGGGCATGACAAAATACAATGCTCATAATAATCATGTCGTGTGCGCATTAGTCAGTAAACTACGAAGAGCTCTCCCCTTATTAATCCGACATGGATGGCAGATGTTACGGCTGTGCGTCTAAATTCACCCGCTTCAAAAAGGagctCGGATGTAAGAACTGTGGCAAGTCCCATTGCTCGGGCTGTCTGAACTACACTGCACTGGTGCCCCGCTGCGGTAACACCCAGCAGAAGGTCTGCAAGCAGTGCCACGCCAATCTCACTAGcCCAGAAGGAGCCCAGAATAATGCTGCTAAATGGTCTCCCCCAGAGAACTACAAAAAGAGGGTGGCAGCTCTGGAGGCCCGGCAGAGCCAGCAAGGTTTGGCATCTGGGCCCAGTACAAAGAGCAGTGCCCCAGGACATACTGTGGCCAAAGGACTGAGCAGAGAGGACCAGGCCATTGCAGAGAGGCTGCAGAGACTGAAGGAGGACACTAAACCCAAATCAATCCCCTCTGAGAAAGAGATAGAGGCCCGGCTGGCAGCTCTGAAGGCCCCTACCCAAACCATCCCCTCTGCCTCGGAGATGGAAGACCGCCTGGCTGCCCTACAGGGACACACCCCACCCTCCCAGGCCTCCAGACCGGTCCACCAGCCCCCTGATCACAGAACCCAGACTGAAAAAGCCAACGATCTGATTAGCCAGCTGTCTGAGGAGGTAGCCATCGACAACAGATACGAACCAGACTCAACCTCGCAAGGCGTAACAGGCACGGACGGCCCTCTAAACAACCTGAACAAGGAGGAGGGTGGGGCGTTGGACGAGAATCTGGATGATCTACAACGGGACGCCAAGCAACTGGAGGCCGAGAAGAGCCGTCTGCTGACAGAAGCCAtggaggagctgaagaaggAAAAAGTGGGGCAGGGGCAGGTGCTGCAGATGGCCAAGAGGCTGGCACTCCTCAAGGGACAGGACCCGGACAAAATCACTGCACAGGATCTAAACCAGTCGGACAGTGAGGAGGAAACGGAGGAAGAGGCAGTGAAAAGGATGTTGAAAAAGCTGTCTGAAGAAGCCGCTTTAGATGAAGCCAGTGGCTACAACATCCCACCTGAACAGAGCGGTCCAATAAATACAGAGAAGCCAGGAGGTTATAAGAAGGTGCCCAGTGCGGTGCCGTCCACAGTGGGTAGAAAGCCCGCTGCCGGGGCCCTGGCCTCGGACTCTGATGAAGAAGAGCTGCCCTGGTGCTCTCTCTGTAACGAAGACGCCACTATACGCTGCCACTCTTGTGATGGGGACCTCTACTGTAAAAGATGCTTCAGGGAAGGTCACGACGAGTTCGATAGAAAAGAACATCAGACAGACCCTTACCAAGCACCGCAGAAAACGAAAAAGAAGAAGTGAAATGCTGATGTACGGAGTTCCTGTCGGAGACAGTAGCAGCCTTTGGCAAAGACACGAGAGAAAACCCTTGACgtgctttgtttgatttagTGCTTTATCATCAGGAATTGATTGGAACTGCACAATAGTTATCTTTGTCTAGCAGAGGAGCAGATCTTATGAAGGCACTTAGTCTTTTATATCAGTAgactcaaataaaataatctctttATTACAGCTTCAAGATCACCCTAGTCACAATCCGTGTTTATACTCCACTGGAAACATTTCAATAAGAGAATAAGCAGAGTTTACTGAGATTGTGACTAGTAACGCAAATAAGTAGTAACTGACACAAACATAATTGATGTAGGGATTGAGTGCATGTGCAGGATTTACTAGAATTTATCCAAGAAATCTAGATTTCTAATTTCTTCAAACAACAATAACTTAATAAGAAAATCTCCTGGGTGTGACCATTTTCATTGTATGAGGAGAGAATGAGGCATCTGATATATTCTTTATCTATTCATAATAACTAGCGGTGTTCAGATTAGtcaaaattgtattatgaatgtttttatttggtgattttatgtttaaatcaCATACAGGTACTATTAATGGGGTCTCGGCAGACAATTACATACTGTCAGTGTTGCACTCTTAACTGGAAACTTGAAGATTCAGCTGTGAGCAACTTTAAGTTATTAATTCCTACATTTAGTTACTTCTGGTTATAGAAATAGCaatatctttttaaatatagcttCTGACGTGGGCCTATGCCCACGGACGTCTAGCACACTCAAGACTATAAGGCATTACTGTTAGCTTAATTAGACCCTGAGTGCTTGTGAACACCAGTCTCTCCAATTAATCTCACAAGTGACTAATCAAGGTCTTAGTTGCTCCAAAATGACTCATGCTTTTAGCTCTGTGGTCTCTGAACTCACAGCTGGATACGTTAGAAACccgtatatatagatataatgcATAATCTCCCTTTCAGTCCTCTGTtgccataaataaaaataaggaaaacattCTTGAGGAAAAGTACCGTTCTACCTTACATGTTACATTAAGATGTTCCCAACCATGCAAAGggatttttagttttctgtccTCTTGAGCTGCATTTGAAGAGCCATTTGTAACCAACAGTGATCTTTGTATGTTGTCCTATAGCAGAGGTACATTGGCTAAAGGTCAAAATATAAGGCTGTGCAGGATGGgttttcttttcagaccacTTGGGCAGTCACTGATGTGCCAGATGTCTTATATATAggtatacacatttttatatttttattattattattattattattattattatatttattatttctaatgtgAAGAACTGTACTTTAAAGATTCTGTAaattcagtttctgtttttatgtccTGTTATTGGTCCATTTTGAAGAAGAGTATAAGGACAGGAAACAGTCCATTTACGATTTAAGTGCTTtatccaccccccacccccaacacttCAGAAGTCAGTTAGAGGACAAAGTCCACTGATAGGCAAATGTATATCATTTCTGAACCGAAAGTTCTCAACACTCCTTAATGGCACTTTAAGAACCTTTTCATGGCCTCTGTATAATCCACACAGACATGGGCAAGTTAGTCATGTTGGATAATATactatgcacacacacacttcagttcAGTGTCTTACGACGTTATATGTGTATTTCATAATATACCTAATTGGTGAAAATGATTCAATTACAGGTTTAATTCTGGAATGTTTACATTTCCGTTGGTACGCTGTTTGGTTTCCTCCTGTGACAAATATTTGGAGCATCCCTCCCTCTGTCTATCTTTGTTAGCTAATTAAACTTGGCCTGGTGTATTAAATTGCCTAGTTCTACATAATCCCAGGATATTACATGTTTTCTGCACACTTCTTTTGATACTGTATAATCTAGATTGTATTGTAAGggagaaatacaataatttgtaaatatattgaaaggaaaatgcaaacaaagtaaATTTCCCTTAGctctgtattgttattattattttcatctgaAAGTATTTTTAGCTGTGCAAACATGCAAGTTctttttacagctgttttaaggggaggaaacaaaaataagtccGTAATTGTATTTGCTGTTACAGGGTTGGCATAGAAACACCTCACATTTCAGTCAGATCTAGATGTTATACAGCACAGATCTAAAACTGCACTACATTGTGGATATAGCTAATAAGAAAGaccattgttttcattttgtgaatcAGGTGCGGGTAACTCCTTTCGGTCTTTCTGTGCATCTCATTTGTTgttcaaaatgatttaataaaattcattattaaagaaaattatattaatccTTGCCTCCACACAATTTAATGAACCTCAAAGTAGGAGAACTTTCATTGTTTGGATTAAATACTCTTGTAAAGTAGTTAATTTCTGAT

Function

GO: NA

KEGG:

id description
K24778 ZFYVE19, ANCHR; abscission/NoCut checkpoint regulator

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000106 True 3919 mRNA 0.42 12 3920595 3928012

Neighbor

gene id symbol gene type direction distance location
AMCG00000107 NA coding downstream 23375 3876364 ~ 3897220 (-)
AMCG00000105 NA coding downstream 116234 3780983 ~ 3804361 (-)
AMCG00000092 NA coding downstream 184993 3726337 ~ 3735602 (-)
AMCG00000091 NA coding downstream 211625 3708383 ~ 3708970 (-)
AMCG00000080 NA coding downstream 520942 3388190 ~ 3399653 (-)
AMCG00000115 NA coding upstream 49704 3977716 ~ 3979326 (-)
AMCG00000118 NA coding upstream 85227 4013239 ~ 4037286 (-)
AMCG00000119 NA coding upstream 134941 4062953 ~ 4100974 (-)
AMCG00000116 NA coding upstream 195143 4123155 ~ 4130843 (-)
AMCG00000117 mthfd1,LOC105015635 coding upstream 231896 4159908 ~ 4179114 (-)
G148041 NA non-coding downstream 159978 3760302 ~ 3760617 (-)
G148011 NA non-coding downstream 232364 3687963 ~ 3688231 (-)
G147997 NA non-coding downstream 277926 3642365 ~ 3642669 (-)
G147941 NA non-coding downstream 456963 3463303 ~ 3463632 (-)
G147921 NA non-coding downstream 611794 3307169 ~ 3308801 (-)
G148181 NA non-coding upstream 302630 4230642 ~ 4231328 (-)
G148198 NA non-coding upstream 619812 4547824 ~ 4548060 (-)
G148364 NA non-coding upstream 1308856 5236868 ~ 5240683 (-)
G148400 cdca4 non-coding upstream 1449737 5377749 ~ 5380128 (-)
G148416 NA non-coding upstream 1522988 5451000 ~ 5454248 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other downstream 361694 3552159 ~ 3558901 (-)
AMCG00000050 NA other downstream 2979760 890112 ~ 940835 (-)
G147324 NA other downstream 3435012 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 3528113 387118 ~ 392482 (-)
AMCG00000161 NA other upstream 1143455 5071467 ~ 5077246 (-)
G148395 NA other upstream 1410797 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 2076174 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 2117653 6045665 ~ 6067184 (-)
AMCG00000168 gchfr,LOC106583112 other upstream 2222708 6150720 ~ 6154301 (-)

Expression


Co-expression Network