AMCG00000114


Basic Information

Item Value
gene id AMCG00000114
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4131629 ~ 4135410 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000114
GTGgacatgtacagtacagagtCATGTGACAGGGGCAAGCCGAGCTCTCGGTCGCATCGAAAGCAACGCGAGACTGCGCGAGAACTTCCCTGCAGCAACACATACGAAATCTAAATCAATCTTTAGCGTATAGGTGGTCACTGTGGCATCATGGATGTGTCCAGCCACAGTCTGTTCCTCTTACAGCAACTGAACATCCAGCGGGAGTTTGGCTTCCTGTGCGACTGCACTGTAGCCATCGGCAATGTCTATTTCAAGGCTCACCGCGCCGTTTTGGCTGCTTTCTCCAACTACTTTAAAATGATCTTCATTCACCAGTCAAGTGAGTGCATTAAAATACAACCCACTGATATACAGCCTGACGTATTCAGTTATTTGCTCCACATCATGTACACCGGAATGGGCCCCAAGCAGCAAGTTGACCAGGGTCGATTGCAGGAAGGGATTAAATTCCTTCATGCGTATCAGCTATACCGAAACGCAGGGGAAGACGGTCAGGAGTCCACTATTGATTCCATCAAAATTTCGAACCTGTACGGGATCCAGATATCGTCGCAGATGGCTGCCAAGGAAAACGTGGCCCCGAAAGAGAGCCACTCCCTGGGTTTGGAAGATGAAAGGTCCGGGGCTCAGGCTGACCATTCTCAGATCCAGCTCTCTCTTGCGGTGGGACTGGAGGGAACCTCTTCCGAGAGGCCGCTTTCAAGACTTCATGGGCCTTCCCCTGTAGCTTCCAGAGAGGAACGCGAGGCTCCCAACATCTCGGTGAcaataaaacaggaaaaggtGGAGTCTGAGGTGTCCACTGAACCTCAGACCAGCTCCCCAACAAACCAAGAAAGCCAAAGCCCTAGCCTCTTCAAAGAGAGCCCCAAGTTCCTGTATTGCCACTACTGTGGGGAACGCTGCAGCTCGCGCCGGAGTCTGAGAGAGCACCTCTTCACCCATGCGACCAGCTCTCTGCCTTTTGGGGTGCCAGCTGCCATCCTGGAGAACAACAACCTGGGGGAAGTGCAGAAGATCACGGGGGACTTTGAGGGGCTGGGGGAGCGCCCCTTGCAGAGCTTCCTGGTGCGGAAAAGCCCCCAGTCGCAGGAGCAGCCGGAAGCGGGCAGCATAGAGGACACCCTGCAGCAAAATCAGTCATTGACATTGTCCTCTGAAGAGCTGGCGGCAGAACTGAAAAGCACCAGTCCATACTCCCGGAAGCGCAAGATTGCCTGTGCGATCTGCAGCCTCAGATTTGCGCAGAAGAGCCAATTGCAGGAACACATGTACACCCACACAGGTAAACACTCCCGCTATCACCGGTACAACCGATTCTGTAGTCAGTTGATCCAGGCATCCCAGCACTACTGCGAAAGTCAGGCTGAGTACTCGGTCGAAGAATCTGCTAGGGACTCTCAAGACAATGTCAGTTCTTGTTATTCCTTAGACTCTGAGATTTCTCAAGAAAGCATTGATACTGTTGTTgtagaataattattattattaacacaaaaaaacattcctggGATCTTTTTAGACAAAGCCCTGCTTATTAACCTACTTCTGACATTCCCTTTTTTACTTACCTTCTCTTCCATTTCTTGTAACTTTTGCTTCCTGTCATGTGACACTAATTAAGCCCAATTGGCTGTCTGACTGCTATTATTGATGCTGTATCTTTGGTTTCAGTATCTGTGAATCTGCTTTTGTTACCAATAGAGACTACTAAATGGTAAAGTACTGGTGTAATGGAACTTGTGTCATCTTTCTTTATTCATTCTTCGTTAAGATCAAAACAATTACAACTGTCAATGTTGGTTCATAG

Function

GO: NA

KEGG:

id description
K10504 ZBTB25; zinc finger and BTB domain-containing protein 25

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000114 True 1813 mRNA 0.49 3 4131629 4135410

Neighbor

gene id symbol gene type direction distance location
AMCG00000108 NA coding upstream 60195 4044112 ~ 4071434 (+)
AMCG00000109 myh6,LOC102786665,LOC103031694,LOC108251423,LOC107589804 coding upstream 122341 3998178 ~ 4009288 (+)
AMCG00000103 NA coding upstream 155206 3957641 ~ 3976423 (+)
AMCG00000104 NA coding upstream 190836 3928472 ~ 3940793 (+)
AMCG00000102 pp14b,ppp1r14d,LOC105916596,LOC101077163,LOC105908342 coding upstream 215676 3906422 ~ 3915953 (+)
AMCG00000112 NA coding downstream 56424 4191834 ~ 4225082 (+)
AMCG00000111 NA coding downstream 108238 4243648 ~ 4280265 (+)
AMCG00000110 NA coding downstream 189099 4324509 ~ 4354247 (+)
AMCG00000121 NA coding downstream 550179 4685589 ~ 4705926 (+)
AMCG00000120 NA coding downstream 621574 4756984 ~ 4760814 (+)
G148119 NA non-coding upstream 118226 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 252108 3876371 ~ 3879521 (+)
G148036 NA non-coding upstream 372626 3728325 ~ 3759003 (+)
G148010 NA non-coding upstream 443398 3687963 ~ 3688231 (+)
G147994 NA non-coding upstream 500174 3630582 ~ 3631455 (+)
G148143 NA non-coding downstream 25445 4160855 ~ 4162311 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding downstream 38027 4173437 ~ 4175716 (+)
G148200 NA non-coding downstream 446901 4582311 ~ 4582551 (+)
G148396 NA non-coding downstream 1218541 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 1247158 5382568 ~ 5388814 (+)
G148040 NA other upstream 371005 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 407313 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 432536 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 1727657 2403730 ~ 2403972 (+)
AMCG00000073 mta1,LOC107679789,LOC107666257,LOC107600838 other upstream 2072859 2036023 ~ 2058770 (+)
AMCG00000136 btbd7 other downstream 953029 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 1171780 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 1199103 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 1299748 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 1745613 5881023 ~ 5888027 (+)

Expression


Co-expression Network