AMCG00000121


Basic Information

Item Value
gene id AMCG00000121
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 4685589 ~ 4705926 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000121
ATGCTAAGTGACGGCCGGGAGGATCTGTATGAGCAGGGGAGGCAGTTTCAGCAGCAGGGGGAGTCAGAGGCCGCTCTTACGTGCTTCCTGACCTGCCTGTTCGGCCTGACGCACGTACACAGCTTCCACTCGCTGCCACAATGTCTTCACCAGATCACTCATTTTCAGCACAAAAGCCCTCCTGAAGTAGCACAGCAGGGTGAAGGAGCATGGGACTCTGTCGAGGATCTGTCGGCGCAGGCCTCCCAAGCCAGGGACTATGAGAACCTAGCCCAGCTTTGCATCATGAGTAAAAGGCCTCATCTTGCTCTAGAGTACAGTGGAAAGGCAACTAAAATTAGGCAGAAAGCATTTGGTAATGACCACCCAATTACTGCAAGGAGCCTCGAGCTGCTGGCTTCAGTCTATGCGGAAATCGGAAAGACAGAGTATTCAGATGCATTAGGACAGTATATGTCAGCACTTTCCAAGACTTTCACCACCACTGACTCATTCAGCGATGCTCTTAATGGTGTTCCCCCAGCAAAGAGCGAGGATCGCTTGGACGTGAGGCTTCAGCACCAAAAGGAAGTCCTCCCTCCACCAGAAGTCGTAAACCACAAGAATGGCATTCCTACAACGTGTACATTCCCAACCTCTATCCTGAGGAAGAGGTCAAACTTAAGCAGCCATGACGGCGAGGCAACGCACAGAAAGAGGTCAGAGCGCAGGGTTCGCTTCAGGGACCCCGAGATCATCGTTCACAcGTACGACGACTCCAGGAGCAGACCCCACTTTGCTCTGCTGACCTGCATGTTTGTGCTGCTGTCGCTGCTGGGAGCCGTGCTGTTCTGTACGGACAGGCGGAGGCACCTGAGAGCCTGCGAGGAACTGGAATCCATGTTAATTGTCTACTTTGTTCAGGTGAAGCAAGTTCTGTGGGGCTGTTGGATCTGGCTAACAATGCAGTGA

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000121 True 951 mRNA 0.53 8 4685589 4705926

Neighbor

gene id symbol gene type direction distance location
AMCG00000110 NA coding upstream 331342 4324509 ~ 4354247 (+)
AMCG00000111 NA coding upstream 405324 4243648 ~ 4280265 (+)
AMCG00000112 NA coding upstream 460507 4191834 ~ 4225082 (+)
AMCG00000114 NA coding upstream 550179 4131629 ~ 4135410 (+)
AMCG00000108 NA coding upstream 614155 4044112 ~ 4071434 (+)
AMCG00000120 NA coding downstream 51058 4756984 ~ 4760814 (+)
AMCG00000128 LOC107698615,LOC107568572 coding downstream 90443 4796369 ~ 4803426 (+)
AMCG00000126 NA coding downstream 101242 4807168 ~ 4809507 (+)
AMCG00000127 NA coding downstream 131659 4837585 ~ 4843986 (+)
AMCG00000132 NA coding downstream 167374 4873300 ~ 4892210 (+)
G148200 NA non-coding upstream 103038 4582311 ~ 4582551 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 509873 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 523278 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 672186 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 806068 3876371 ~ 3879521 (+)
G148396 NA non-coding downstream 648025 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 676642 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 834753 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 972057 5677983 ~ 5678620 (+)
G148468 actn1,LOC100696265,LOC101469024,LOC106600942 non-coding downstream 1009667 5715593 ~ 5719481 (+)
AMCG00000113 NA other upstream 492556 4112120 ~ 4193033 (+)
G148040 NA other upstream 924965 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 961273 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 986496 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 2281617 2403730 ~ 2403972 (+)
AMCG00000136 btbd7 other downstream 382513 5088439 ~ 5161195 (+)
AMCG00000145 NA other downstream 601264 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 628587 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 729232 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 1175097 5881023 ~ 5888027 (+)

Expression


Co-expression Network