AMCG00000135


Basic Information

Item Value
gene id AMCG00000135
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5117082 ~ 5122230 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000135
ATGGGTGTAAATGCGTCCAGCTACCCTCACTCATGCTCCCCTCGGATCGGGGGAAACTCACAGGCACAGCAGACTTTCATAGGAACCTCCTCCTACTCTCATCAGGGCTATGGCTGCGAGTCAAAGCTGTACAGCCTGGAGCACGGCCACGAGAAGCCCcaggacaagaagaagaagagctCTGGCCTGGCCACTCTCAAGAAGAAGTTTATCAAGCGCCGAAAGTCCAGCCGCTCTGCTGATCATGCCAAGCAGATGCGGGAGCTACTGTCGGGCTGGGACGTGAGGGATGTCAACGCCCTGGTAGAGGAGTATGAGGGGACAGCTGCTTTGAAGGAGCTCAACTTCCAGGCCAGCCTGGCCCGACCAGAGGCCTTCACGCTACAGAAGGACCTGGCTGACCTGTACGAGTACAAATACTGTACCGACGTCGACCTGATTTTCCAGGACACGTGCTTCCCTGTGCACCGGGCCATCCTGGCCGCACGCTGCCCCTTCTTCAAGACGCTGTTGTCTTCCTCTCCGGAGTACGGAGCGGAAATCATGATGGACATCAACACCGCAGGCATCGACATGCCCATGTTCTCTGCACTGCTGCACTACCTGTACACCGGAGAATTTGGCATGGATGACTCGCGCTTCCAGAACGTGGACATCCTGGTGCAGCTCAGCGAGGAGTTCGGGACACCGAACTCCCTGGACGTGGACATGCGGGGCCTCTTCGACTATATGTGCTACTATGACTCCGTCCTCAGCTTCTCCTCTGATTCGGAGCTTGTGGAGGCATATGGGGGCAGCCAAGGCtgcctggaggaggagctgaGGGCCCACAAGGCCGTCCTCTCAGCCCGCTCCCCTTTCTTTCGCAACCTCCTACAGAGGAGGATACGGACCGGGGAGGAGATTACGGATCGGACGCTGCAGACCCCGACCAGGATCATCCTGGATGAATCGATCATTCCCAAGAAGTACGCCAAGGTCATCCTCCACTGTATGTACACGGACGTAGTGGACCTCTCCTACGTGCTGCACTGCAGTCCTTCGGTGGGCAGCTTGAGCGAAGTACAGGCTCTGGTTGCAGGCAAGGGAAACATGAGCCGAGCAGAAGAAGCCATGGAGCTGTACCATATAGCGCTCTTCTTGGAATTCAACATGCTGGCACAAGGTATGTTACCCTAG

Function

GO: NA

KEGG:

id description
K10479 BTBD7; BTB/POZ domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000135 True 1179 mRNA 0.57 2 5117082 5122230

Neighbor

gene id symbol gene type direction distance location
AMCG00000159 unc79,LOC106586068 coding upstream 31135 4940648 ~ 5085947 (+)
AMCG00000133 NA coding upstream 182886 4931735 ~ 4934196 (+)
AMCG00000132 NA coding upstream 224872 4873300 ~ 4892210 (+)
AMCG00000127 NA coding upstream 273096 4837585 ~ 4843986 (+)
AMCG00000126 NA coding upstream 307575 4807168 ~ 4809507 (+)
AMCG00000137 NA coding downstream 47831 5170061 ~ 5171426 (+)
AMCG00000139 itpk1,LOC106597151 coding downstream 85120 5207350 ~ 5237287 (+)
AMCG00000148 NA coding downstream 198115 5320345 ~ 5329033 (+)
AMCG00000152 NA coding downstream 218672 5340902 ~ 5373337 (+)
AMCG00000147 cdca4,LOC106599634,LOC106610950 coding downstream 253385 5375615 ~ 5380159 (+)
G148200 NA non-coding upstream 534531 4582311 ~ 4582551 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 941366 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 954771 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 1103679 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 1237561 3876371 ~ 3879521 (+)
G148396 NA non-coding downstream 231721 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 260338 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 418449 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 555753 5677983 ~ 5678620 (+)
G148468 actn1,LOC100696265,LOC101469024,LOC106600942 non-coding downstream 593363 5715593 ~ 5719481 (+)
AMCG00000113 NA other upstream 924049 4112120 ~ 4193033 (+)
G148040 NA other upstream 1356458 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 1392766 3720985 ~ 3724316 (+)
AMCG00000094 NA other upstream 1417989 3690772 ~ 3699093 (+)
G147726 LOC104962440 other upstream 2713110 2403730 ~ 2403972 (+)
AMCG00000145 NA other downstream 184960 5307190 ~ 5314953 (+)
AMCG00000146 NA other downstream 212283 5334513 ~ 5340550 (+)
AMCG00000142 NA other downstream 312928 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 758793 5881023 ~ 5888027 (+)
AMCG00000175 NA other downstream 878681 6000911 ~ 6011397 (+)

Expression


Co-expression Network