AMCG00000146


Basic Information

Item Value
gene id AMCG00000146
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5334513 ~ 5340550 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000146
gtacagcacagtggagccCAGATTGTGAACAATGAGTGCGGATCCTCCATGCTCGCAGAGAACATGTCACTTTGTTCATTTCACAGCGGAACCACCCATGATGAAAGTAGGAAGGTAGTCATGGACAACAGCACCTGTACCCCCCCTTACTCTGAGGACCGCATCCCCCTTGTTGTCCTCTACAGCATCGTGATCATCATCGGCCTCCCGGCCAACTTGGCCACAGTTTACATGACCTTCCTGCAAGTGCTAAGGAAGAATGTGCTGGGGATCTACCTGCTGAGCCTGTCCCTGTGCGACCTCATGTATCTCTGTACCCTGCCACTGTGGACCATCTACATCAACATGGGCCACGAGTGGCTGTGGGGCTCCATGGCCTGCAAGCTGACTGGCTACGTGTTCTTCAACAACATGTACATCAGCATCTTCCTCCTCTGCTGTGTCTCCATCGACCGCTATGTTGCTGTGGTGTACGCCGTGGAGTCCCGGGGCTTGAGGAAACAGAAGCTGGCGGGCATCATCACCTGCGCCCTGTGTGTGCTGGTGGCAGTGGGCCATGTCCCCGTTTTCATAATGAAAGAGGGCAATACGGAAGGGACGCAGAAACTGTGTTTCGAGCCCGGGCAGAACACAGCCATGGTGACAGGCTTCAACTACGCCCGCTTCTTCATCGGCTTCTTCATTCCCTTTGTAATCTTAGTGGTCACCAACCGCTCCATCTTCGTCAACATTCAGGCCAGCACGGGGCTGCGCAGGGAGCAGAAGGTGAAAGTGAAGTACTTGGCCATCGCTGTCATACTCTTGTTCTTGGTGTGTTTCGCCCCTTACCACATGATCCTCTTGCTCCGGGCAATCATGTTTCACTTCAACCTGAAAAACTGTGTCTTTGAGGACTACGTGTACACCCCCTACACCATCTCCCTGGGACTGTCCACCTTCAACAGCGCCATGAACCCTATTCTCTACGTGCTGGCCAGCGACAACATTCGCAAGGAGATCCGCCGCAGCCTGATCAGCTTTCGGAGCCGGACCTCTTTGCAGCACAAGGGCACGGACAGCAGCCTGCCAAAATTGCAGAACTCCAAAAACTCGTCCGACTCCACCCCCATGcgggacaacaacaacacctgAGCTTGCGCTGCATCAGGATATAATATGTCTTGTCTTTTCTGCAAGACGATATCTGCTGTTGACAAACCATGTTCCACTAAGTGTGAATGCTGCAAGACCTTAGTGGTTTCCTCTCTACAGGCCTCGTCTTTGGAGACTcttatacagcattttttccgTTCTGAAAGTATTTTGTATCTTCTCTGGAGTAGTTTTTCTGAACTGTTCATGGATAGAAAAAGGGACAAAGGAAGAAAATCTGGTGTTGATTTGTACAGACTAGTGCTCCTCTCTAAATTagtgaattaaaatacatgtgtgcatgtgtatgtgtatatgtatgcatatttacCAAAAGTATTAAGTAATACTTAATAGTAGTATTAAGCTTTTGACGGTGTCTGCAATAAGTTGGGCCTAAACGACTACTGCCGTCCTCCAGATGCCAATTCTGTGCCATTCCTCCCAGTGCAATGTCTAGTTCATTGAGAGCATTGGTCTCTGTCATCTCTATCTGACTGATGGGTCACGTTGATCCCTGAGCTGTTCTATTAGATTCCTAGGCAGGACTGTTTCACCAGGTATTCCTTATGAAGTCAAGAGCCCTTTGTGACGAAATGTGCTATCAGGCTGGTAGCTGTACAGGCACGCATTGTAGTATGCCGTCAATGCTGGCAGCATCCTGATGTCTCAAATGCCACCATGCAAAACAGGGGCAAAGGGGCCtgtaacaaattaaaagcaaaggaaac
>TU186736
GCAGCCTGCCAAAATTGCAGAACTCCAAAAACTCGTCCGACTCCACCCCCATGcgggacaacaacaacacctgAGCTTGCGCTGCATCAGGATATAATATGTCTTGTCTTTTCTGCAAGACGATATCTGCTGTTGACAAACCATGTTCCACTAAGTGTGAATGCTGCAAGACCTTAGTGGTTTCCTCTCTACAGGCCTCGTCTTTGGAGACTcttatacagcattttttccgTTCTGAAAGTATTTTGTATCTTCTCTGGAGTAGTTTTTCTGAACTGTTCATGGATAGAAAAAGGGACAAAGGAAGAAAATCTGGTGTTGATTTGTACAGACTAGTGCTCCTCTCTAAATTagtgaattaaaatacatgtgtgcatgtgtatgtgtatatgtatgcatatttacCAAAAGTATTAAGTAATACTTAATAGTAGTATTAAGCTTTTGACGGTGTCTGCAATAAGTTGGGCCTAAACGACTACTGCCGTCCTCCAGATGCCAATTCTGTGCCATTCCTCCCAGTGCAATGTCTAGTTCATTGAGAGCATTGGTCTCTGTCATCTCTATCTGACTGATGGGTCACGTTGATCCCTGAGCTGTTCTATTAGATTCCTAGGCAGGACTGTTTCACCAGGTATTCCTTATGAAGTCAAGAGCCCTTTGTGACGAAATGTGCTATCAGGCTGGTAGCTGTACAGGCACGCATTGTAGTATGCCGTCAATGCTGGCAGCATCCTGATGTCTCAAATGCCACCATGCAAAACAGGGGCAAAGGGGCCtgtaacaaattaaaagcaaaggaa

Function

GO:

id name namespace
GO:0038166 angiotensin-activated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG:

id description
K08426 GPR132, G2A; G protein-coupled receptor 132

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000146 True 1862 mRNA 0.49 2 5334513 5340550
TU186736 False 803 lncRNA 0.43 1 5339746 5340548

Neighbor

gene id symbol gene type direction distance location
AMCG00000148 NA coding upstream 5480 5320345 ~ 5329033 (+)
AMCG00000139 itpk1,LOC106597151 coding upstream 97226 5207350 ~ 5237287 (+)
AMCG00000137 NA coding upstream 163087 5170061 ~ 5171426 (+)
AMCG00000135 NA coding upstream 212283 5117082 ~ 5122230 (+)
AMCG00000159 unc79,LOC106586068 coding upstream 248566 4940648 ~ 5085947 (+)
AMCG00000152 NA coding downstream 352 5340902 ~ 5373337 (+)
AMCG00000147 cdca4,LOC106599634,LOC106610950 coding downstream 35065 5375615 ~ 5380159 (+)
AMCG00000141 NA coding downstream 49775 5390325 ~ 5395773 (+)
AMCG00000143 NA coding downstream 123399 5463949 ~ 5470513 (+)
AMCG00000155 ttc9 coding downstream 192060 5532610 ~ 5535596 (+)
G148200 NA non-coding upstream 751962 4582311 ~ 4582551 (+)
G148146 mthfd1,LOC106952296,LOC105908326,LOC103136077 non-coding upstream 1158797 4173437 ~ 4175716 (+)
G148143 NA non-coding upstream 1172202 4160855 ~ 4162311 (+)
G148119 NA non-coding upstream 1321110 4011654 ~ 4013403 (+)
G148075 NA non-coding upstream 1454992 3876371 ~ 3879521 (+)
G148396 NA non-coding downstream 13401 5353951 ~ 5354185 (+)
G148402 NA non-coding downstream 42018 5382568 ~ 5388814 (+)
G148452 NA non-coding downstream 200129 5540679 ~ 5544478 (+)
G148459 NA non-coding downstream 337433 5677983 ~ 5678620 (+)
G148468 actn1,LOC100696265,LOC101469024,LOC106600942 non-coding downstream 375043 5715593 ~ 5719481 (+)
AMCG00000145 NA other upstream 19560 5307190 ~ 5314953 (+)
AMCG00000136 btbd7 other upstream 173318 5088439 ~ 5161195 (+)
AMCG00000113 NA other upstream 1141480 4112120 ~ 4193033 (+)
G148040 NA other upstream 1573889 3760179 ~ 3760624 (+)
AMCG00000093 srp14,LOC106610862 other upstream 1610197 3720985 ~ 3724316 (+)
AMCG00000142 NA other downstream 94608 5435158 ~ 5454206 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other downstream 540473 5881023 ~ 5888027 (+)
AMCG00000175 NA other downstream 660361 6000911 ~ 6011397 (+)
AMCG00000201 NA other downstream 1128795 6469345 ~ 6474232 (+)
AMCG00000198 LOC106586563 other downstream 1160343 6500893 ~ 6520863 (+)

Expression


Co-expression Network