AMCG00000150


Basic Information

Item Value
gene id AMCG00000150
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5274675 ~ 5285432 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000150
tggaaacggggcaagACTGAAAGAGTTatggtgtttgttgttgttgatgtccCTTTCCTTATAATTACTGGTAAATCTTACTGGCACACAACCTTTGTCATGCAGTTATTAAAAAGGGGAGGGCAGATAAGATAAGCTAATACGAGGTCATCCACCTTGTTTTAAAGCTAGTTCTCTAAAGGCAAGAGATACAGATTCCCACTCAAGCTGTTGACCATGGGGCGCCTTTCAGTCCTTCTCACGATCTGTATTTTCTGTGCCAGCTCCGTTCGAGGGGATGACTGGATGAAACAGTATGATGAAGTGGTGAAGGAATTCAGTGAGCAGGATAAAGCCCAGGAGTTTCCAGAGAAATCAAGATCCCAGAGTTTCCTACACCCCCCCTTTCAGTGTCCTGACATGGCACCCTCAAAAACAGTTCCCACTTCAGTTAAGTACGTGAAGCCAGCAGACATCAAAGTCATCGCTGCTCTGGGGGATTCACTGACAACAGCCATTGCTGCGAATGCCTCTAATGTCATTGGGGTACCATTCGAATACCGTGACGTTTCTTGGAGTATTGGGGGCCATGGGTCTTATCAGGAGGTCATCACTCTTGCAAATATCATTAGACTGTTCAACCCCACCGTCATTTTCCCAGCTCCACAAGTCACTATTAACAATGTGCAAGCCAACATCAATCAAACCGGATTCAACCTGGCTGTCACCGGACACAATTCCTATGAATTTCCACAACAGACCAGGAACCTGATCGACACATTCAAAACCTACCCTGGCATGAACTTCAAAGAGGACTGGAAGCTGCTGACCATTCTTATAGGAAACAATGATATCTGTGACTTCTGTAAGAATAAGaCCCTTTTTTCTACAGAGAGTTTCATTCATAACTTGACCGTTGCCTTGGACATGTTGTACCATGAAGTGCCCAGAATGATAGTGAACCTGGTCGAGGTGCTGCCCCTGGAGGGCCTTCGAGAAGTGGATGACAAGAGCATTGGGTGTCTTCTTCAGAAATCATTCTGCTCGTGTCTGGTGAAGCCCCCAGAGAATTCCACTGAGCTGAAAGAACTCATTGAGCTGAATTATGAATTTCAGAGAAAAATGGAGCAACTCATTAGCAGTGGCCGATACATCAAGGATGATTTCGACGTGGTTCTGCAGCCCTACCTGAAAAATATCAAGCCTCCAAAGTATCCGgacGGAACGATTGATTACTCCTTCTTCACCGTAGATTGCTTCCACTTCACCATTAAGGGGCACGAAAGCCTGGCTAAAGGACTGTGGAACAATATGTTTGAACCCGAGGGGAAAAAGACTTTGATAGACACCTTTTCAGAACCCTTACAACTCATCTGTCCACCAGAGGACCATCCTTACATATACACCACCGAGTCTGCTGGGCAGGATCTGCGGCCCACTCTAGCGTTGATTCTGCTGGTGCTCAGTCACGTCCTGTGAAGCCCAGGAGCTCCGTTCTTCAGTCAAACCAAGACTTCAGCAGCAAATCTACCATTTCTGCCATCTGTGGGAAGAAATTGCATGGAGACTGTTTGTTGGGCAACAGCAGAATAGGAGAACAGTCTCTCTAAGGTTCTCTCTAGGTTTTTGGACTTGAGATGTAGACTAGGCCAGAGACATTTCTGCCACTGGACATCTGATACATCTATTAACCAGACAAAATAGAGCAACGAGAtgctatatattatttatgctAATGAGGgcttttattttggttattaatGATTATTCGTTCAAGAAACACTGCTCTGAAACGACTGAATTTGTTTAACGTGAGAACAAGTGGAGTCATTAAACACTGCACTATTGTAGCACAATCCACAAACAATGAGGTCGTTTCAGcgtctttttttaaaccagtgatACGTTTGACTTGTAAAGCAATGAAATAAACTGTGCAAATTGCAAGTAATTCA

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000150 True 1934 mRNA 0.44 16 5274675 5285432

Neighbor

gene id symbol gene type direction distance location
AMCG00000140 NA coding downstream 18287 5243028 ~ 5256388 (-)
AMCG00000138 NA coding downstream 99556 5159727 ~ 5175119 (-)
AMCG00000160 NA coding downstream 207850 5000865 ~ 5066825 (-)
AMCG00000134 NA coding downstream 381308 4892489 ~ 4893367 (-)
AMCG00000131 NA coding downstream 414186 4843992 ~ 4860489 (-)
AMCG00000149 LOC107721334,LOC107659197,LOC107585782,LOC104966051 coding upstream 7756 5293188 ~ 5306080 (-)
AMCG00000151 NA coding upstream 27051 5312483 ~ 5319529 (-)
AMCG00000144 NA coding upstream 112955 5398387 ~ 5407241 (-)
AMCG00000158 pcnx1 coding upstream 186729 5472161 ~ 5516402 (-)
AMCG00000156 med6,LOC102793293 coding upstream 236023 5521455 ~ 5528826 (-)
G148364 NA non-coding downstream 33992 5236868 ~ 5240683 (-)
G148198 NA non-coding downstream 726615 4547824 ~ 4548060 (-)
G148181 NA non-coding downstream 1043347 4230642 ~ 4231328 (-)
G148041 NA non-coding downstream 1514058 3760302 ~ 3760617 (-)
G148011 NA non-coding downstream 1586444 3687963 ~ 3688231 (-)
G148400 cdca4 non-coding upstream 92317 5377749 ~ 5380128 (-)
G148416 NA non-coding upstream 165568 5451000 ~ 5454248 (-)
G148417 NA non-coding upstream 169814 5455246 ~ 5455489 (-)
G148486 NA non-coding upstream 425587 5711019 ~ 5711876 (-)
G148610 NA non-coding upstream 862497 6147929 ~ 6148286 (-)
AMCG00000161 NA other downstream 197429 5071467 ~ 5077246 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other downstream 1715774 3552159 ~ 3558901 (-)
AMCG00000050 NA other downstream 4333840 890112 ~ 940835 (-)
G147324 NA other downstream 4789092 484720 ~ 485583 (-)
AMCG00000037 erh,LOC100699790,LOC101174968 other downstream 4882193 387118 ~ 392482 (-)
G148395 NA other upstream 53377 5338809 ~ 5342491 (-)
AMCG00000180 NA other upstream 718754 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 760233 6045665 ~ 6067184 (-)
AMCG00000168 gchfr,LOC106583112 other upstream 865288 6150720 ~ 6154301 (-)
AMCG00000189 NA other upstream 922082 6207514 ~ 6209957 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location