AMCG00000157


Basic Information

Item Value
gene id AMCG00000157
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5544829 ~ 5573070 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000157
ATGGATGCCTTCAAATCCCCTTTTAATAGTAACTCAAGTGCCATCGGGTCTGGTGCCCAGCCGTCCAAGACAGAGATCGCGGCGGTGGCGGAGGCTGTCGGCTGGCCGCAGAGCCCCCAGAGCAGCACCGCCGCCGCCCCAGCCTCGGTCCCCGCAGTGTCGGGCTACTGGACGGCCGTGTTTGACTACGACGCCGGTGCGGAGGATGAGCTCAGTTTACGCAAGGGCGACCTGGTGGAAGTCTTGTCCAAGGACTCGCTGGTGTCCGGAGACGAGGGCTGGTGGACGGGGATCATAGAGGACAGGGTTGGCATTTTCCCCAGCAACTACGTGAGTAGCGGGCACGGCATCTCGAGAAAGCTGCGGGACAAGGATGCGGAGGACTATCCCGATTGCCCCGCACAGCCTCTGCACCTGCTGGAGATAAACTTTTCCGAGTTGGCCCTGGAGGAGATCATCGGGGTGGGGGGTTTTGGGAAGGTGTACCGGGCTCTATGGCGCGGCGTGGAGGTAGCAGTGAAGGCGGCACGGCGGGACCCTGACGAGGAGGTGGGCCAGACCCTGGAGAGCGTGCGGCAGGAGGCCAAGCTGTTCGCCATGCTGCACCACCCCAACATCATGGGCCTGGTGGGCGTGTGCCTCCAGGAGCCCAACCTCTGCCTGGTGATGGAGTTCGCCCGGGGGGGCTCGCTCAACCGCGTGCTCTCGGGCAAGAGGATCCCCCCTCACACGCTGGTGGACTGGGCGGTGCAGATCGCCAGGGGCATGCACTACCTCCACTGCCAGGCCATCGTGCCCATCATTCACCGAGACCTCAAGTCCAGCAATATTCTGATCTTAGAGAAGGTGGAGAACGAAGACTTGGGGAACAAGACCCTGAAGATCACGGACTTCGGCCTGGCCAGGGAGTGGCACCGCACCACCAAGATGAGCGCGGCGGGCACTTACGCCTGGATGGCACCAGAAGTCATCCGCTCGTCCACCTTCTCCAAGGGCAGCGACGTGTGGAGTTATGGGGTGCTGCTATGGGAACTGCTGACTGGAGAAGTGCCGTTCCGGGGCATCGATGGTCTGGCGGTGGCCTACGGAGTGGCCATGAACAAACTGGCACTGCCCATCCCCTCCACCTGCCCAGAGCCCTTCGCCAGGCTGATGGAAGACTGCTGGAACCCAGACCCCCACTCCCGGCCCACCTTCACCAGCATCCTAGACCAACTGACTGCCATCGAGGAGTCGGGCTTCTTCGAGATGCCAGCGGAGTCCTTCCACTCTCTGCAGGATGACTGGAAGCTAGAAGTGCAGGAGATGTTCGACCAGCTCCGGGCAAAGGAGAAGGAGTTGCGCTCTTGGGAAGAAGAGTTGAGCCGGGCCGCCCTGCAGCAGAAGAACCAGGAGGAGGCGCTGCGGAGGCGAGAGCAGGAGCTGGCGGAGCGTGAGATCGACATCCTGGAGAGAGAACTCAACATCATCATCCACCAGGTGTATCAGGAGAAGCCCCGGGTGGAGAGCCGGCAGGGCAAGTTCCGCCGCAGCCGCCTGAAGCTTCGAGACGGCAATCGCATCAGCCTCCCCTCAGATTTCCAGCACAAGATCACGGTGCAGGCTTCCCCGACGCTGGACCGCAGGAAAAGCCTGATGAGCAGCAGCTCCAGCCCCCCCGCCAGCCCCACCATCATCCCTCGCCTCCGAGCCATCCAACTTACCCCAGGAGAGGGTAGCAAGGCTTGGGGGCGAAACGCTGCATTCCAGCCCGACACGGAGGAGGAGGATCGGAGAGGCCCCCGGAGGAAAGGCAAGACCTGGGGACCTGGGCCACTCTGTCACAGGGAGCTGCACAGTGGGGAGGagagTGTCAAGGTGCCATTGGAAGGGAACAAACAATGGTCCTGTAGCACCCCCAACCTCCGCAAGTCTCCCCGCAGCAGCCCTGCTGTGCCTGGCGTGCCCAGTCTGACGGAGATGGAAAACGAAGACTGCTGCTACGTGACGGAAACAGGGGACGCGTCTCCACCCCTGGAGTCGCCCAGCCACTCCTACCTCTGCATCCCCTTCCACCGAGAAGGGCCTGTCGCCGAGGGCAATGGGGAACCTGCTCCAGCCGCCCCCGCTGCCATCTCGGCCCCTGAAACACCTCCCAGCAGCCTGAAGCGCAGTCCGGCGGGGGGGCGTAGGTCAGAGCTGGTGCTGCTGGGCTGTGGTGCCCTGTTGGCAGCTGTGGGTCTGGGCTTCGACTTGCTGGGCGTCGGCCGGCCGGAGGAGAGCAAGCACCGCTGGGAGGGCTTCTTCCACCGCCCGGGGGGCCAGCGTCGCAGCACCAGCCCTCCCACCAGAAAGCTTTTCCGCAAGGAGAGCCCCCTCCCGCGCCCCGCCCCCCTCCCGGAAAGGaccttcccctcctccctcaccCTGCTCTCGCTCTCCTCCATCTCTGACTGCAACTCCACACGCTCCCTCCTGCGCTCGGACAGCGAGGAGCTGCTGGTGTACCGGCCGGCACCTCCTCCTCCCAACCCCCTGGTCAACACTCACCTGGAGAGCTTCAAACGCCACCCCCGCCAGTCCCTCACCCCCACCCACGTCCCGGCTGTCCCCGCCACCAATCGCACCCTCCGACGAACCCCCTCCGATGGAGCCATCAAGAGGGGCTGCCCCCAGAATAACATCCACCTCCTGTCCCGCGCCACAGAGGGTGTCCCCAACACCTCAGCCGGGAGCCCCAGGGGCCCCAAGTGCGACGTGCCAGAGGTCCCCCGCCTTCCGGACCCTAACTTGGTGTTCCCCCCGACCCCGAGGCGCCGGTGCCCTCCCGAGCGTCCCAAGACCCTGGACTTCTTGGCCCGGCCACGGCCCTCTCCCCGGGCACGCCGGGATCCCTCCTGGGGGGACTCCCCCGGGGGCCCTGGGGGCTGCAGCGCCTCCCCCGCCCACAGCTCCAGCACAGACACCCCGCCCACAGTGGAGGCCAGCTGGAGCGGGGGCTGCCCCTCTGCAGAGCGGTCTCAGGCCCCCGAGCTGTCCACACCCTCCACCCACAAACGCAGCACTCTGCTCGACCAGGAGGATGAGCTCCAGTGCCGGGATGGGACACTCCCCCTCTGCAGACCTGAAACGCAGCTCCCCAAGCCGTCCCCCTACCGCCTGCGGCCGGGCTTCTGGTCTTAG

Function

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0000186 activation of MAPKK activity biological_process
GO:0005524 ATP binding molecular_function
GO:0004709 MAP kinase kinase kinase activity molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K04417 MAP3K9, MLK1; mitogen-activated protein kinase kinase kinase 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000157 True 3162 mRNA 0.65 11 5544829 5573070

Neighbor

gene id symbol gene type direction distance location
AMCG00000156 med6,LOC102793293 coding downstream 16003 5521455 ~ 5528826 (-)
AMCG00000158 pcnx1 coding downstream 28427 5472161 ~ 5516402 (-)
AMCG00000144 NA coding downstream 137588 5398387 ~ 5407241 (-)
AMCG00000151 NA coding downstream 225300 5312483 ~ 5319529 (-)
AMCG00000149 LOC107721334,LOC107659197,LOC107585782,LOC104966051 coding downstream 238749 5293188 ~ 5306080 (-)
AMCG00000154 NA coding upstream 12877 5585947 ~ 5620822 (-)
AMCG00000153 slc8a3,LOC106953081,LOC107091425 coding upstream 85113 5658183 ~ 5659955 (-)
AMCG00000162 NA coding upstream 122685 5695755 ~ 5709603 (-)
AMCG00000163 actn1,LOC107705429,LOC107602958,LOC107739883 coding upstream 141800 5714870 ~ 5742038 (-)
AMCG00000171 dcaf5,LOC102780996 coding upstream 194468 5767538 ~ 5791438 (-)
G148417 NA non-coding downstream 89340 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 90581 5451000 ~ 5454248 (-)
G148400 cdca4 non-coding downstream 164701 5377749 ~ 5380128 (-)
G148364 NA non-coding downstream 304146 5236868 ~ 5240683 (-)
G148198 NA non-coding downstream 996769 4547824 ~ 4548060 (-)
G148486 NA non-coding upstream 137949 5711019 ~ 5711876 (-)
G148610 NA non-coding upstream 574859 6147929 ~ 6148286 (-)
G148801 NA non-coding upstream 1567292 7140362 ~ 7140968 (-)
G148962 NA non-coding upstream 2185612 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 2382902 7955972 ~ 7956264 (-)
G148395 NA other downstream 202338 5338809 ~ 5342491 (-)
AMCG00000161 NA other downstream 467583 5071467 ~ 5077246 (-)
AMCG00000084 zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 other downstream 1985928 3552159 ~ 3558901 (-)
AMCG00000050 NA other downstream 4603994 890112 ~ 940835 (-)
G147324 NA other downstream 5059246 484720 ~ 485583 (-)
AMCG00000180 NA other upstream 431116 6004186 ~ 6012637 (-)
AMCG00000177 NA other upstream 472595 6045665 ~ 6067184 (-)
AMCG00000168 gchfr,LOC106583112 other upstream 577650 6150720 ~ 6154301 (-)
AMCG00000189 NA other upstream 634444 6207514 ~ 6209957 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other upstream 640935 6214005 ~ 6216441 (-)

Expression


Co-expression Network