Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000161 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 5071467 ~ 5077246 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000161 | False | 261 | mRNA | 0.50 | 2 | 5071467 | 5077241 |
| TU186647 | True | 544 | lncRNA | 0.47 | 2 | 5074430 | 5077246 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000160 | NA | coding | downstream | 4642 | 5000865 ~ 5066825 (-) |
| AMCG00000134 | NA | coding | downstream | 178100 | 4892489 ~ 4893367 (-) |
| AMCG00000131 | NA | coding | downstream | 210978 | 4843992 ~ 4860489 (-) |
| AMCG00000129 | NA | coding | downstream | 233917 | 4807171 ~ 4837550 (-) |
| AMCG00000130 | NA | coding | downstream | 275318 | 4765184 ~ 4796149 (-) |
| AMCG00000138 | NA | coding | upstream | 82481 | 5159727 ~ 5175119 (-) |
| AMCG00000140 | NA | coding | upstream | 165782 | 5243028 ~ 5256388 (-) |
| AMCG00000150 | NA | coding | upstream | 197429 | 5274675 ~ 5285432 (-) |
| AMCG00000149 | LOC107721334,LOC107659197,LOC107585782,LOC104966051 | coding | upstream | 215942 | 5293188 ~ 5306080 (-) |
| AMCG00000151 | NA | coding | upstream | 235237 | 5312483 ~ 5319529 (-) |
| G148198 | NA | non-coding | downstream | 523407 | 4547824 ~ 4548060 (-) |
| G148181 | NA | non-coding | downstream | 840139 | 4230642 ~ 4231328 (-) |
| G148041 | NA | non-coding | downstream | 1310850 | 3760302 ~ 3760617 (-) |
| G148011 | NA | non-coding | downstream | 1383236 | 3687963 ~ 3688231 (-) |
| G147997 | NA | non-coding | downstream | 1428798 | 3642365 ~ 3642669 (-) |
| G148364 | NA | non-coding | upstream | 159622 | 5236868 ~ 5240683 (-) |
| G148400 | cdca4 | non-coding | upstream | 300503 | 5377749 ~ 5380128 (-) |
| G148416 | NA | non-coding | upstream | 373754 | 5451000 ~ 5454248 (-) |
| G148417 | NA | non-coding | upstream | 378000 | 5455246 ~ 5455489 (-) |
| G148486 | NA | non-coding | upstream | 633773 | 5711019 ~ 5711876 (-) |
| AMCG00000084 | zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 | other | downstream | 1512566 | 3552159 ~ 3558901 (-) |
| AMCG00000050 | NA | other | downstream | 4130632 | 890112 ~ 940835 (-) |
| G147324 | NA | other | downstream | 4585884 | 484720 ~ 485583 (-) |
| AMCG00000037 | erh,LOC100699790,LOC101174968 | other | downstream | 4678985 | 387118 ~ 392482 (-) |
| G148395 | NA | other | upstream | 261563 | 5338809 ~ 5342491 (-) |
| AMCG00000180 | NA | other | upstream | 926940 | 6004186 ~ 6012637 (-) |
| AMCG00000177 | NA | other | upstream | 968419 | 6045665 ~ 6067184 (-) |
| AMCG00000168 | gchfr,LOC106583112 | other | upstream | 1073474 | 6150720 ~ 6154301 (-) |
| AMCG00000189 | NA | other | upstream | 1130268 | 6207514 ~ 6209957 (-) |
