Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000169 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 6125794 ~ 6126360 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000169 | True | 567 | mRNA | 0.55 | 1 | 6125794 | 6126360 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000179 | inf2 | coding | downstream | 55962 | 6067655 ~ 6069832 (-) |
| AMCG00000176 | chp1 | coding | downstream | 95998 | 6017546 ~ 6029796 (-) |
| AMCG00000178 | NA | coding | downstream | 125132 | 5992473 ~ 6000662 (-) |
| AMCG00000167 | rtf1,LOC102785722 | coding | downstream | 141221 | 5971780 ~ 5984573 (-) |
| AMCG00000172 | NA | coding | downstream | 303668 | 5791583 ~ 5822126 (-) |
| AMCG00000188 | rad51 | coding | upstream | 118359 | 6244719 ~ 6258200 (-) |
| AMCG00000187 | NA | coding | upstream | 134260 | 6260620 ~ 6279544 (-) |
| AMCG00000191 | NA | coding | upstream | 158649 | 6285009 ~ 6288346 (-) |
| AMCG00000182 | NA | coding | upstream | 349081 | 6475441 ~ 6480300 (-) |
| AMCG00000184 | NA | coding | upstream | 394667 | 6521027 ~ 6552330 (-) |
| G148486 | NA | non-coding | downstream | 413918 | 5711019 ~ 5711876 (-) |
| G148417 | NA | non-coding | downstream | 670305 | 5455246 ~ 5455489 (-) |
| G148416 | NA | non-coding | downstream | 671546 | 5451000 ~ 5454248 (-) |
| G148400 | cdca4 | non-coding | downstream | 745666 | 5377749 ~ 5380128 (-) |
| G148364 | NA | non-coding | downstream | 885111 | 5236868 ~ 5240683 (-) |
| G148610 | NA | non-coding | upstream | 21569 | 6147929 ~ 6148286 (-) |
| G148801 | NA | non-coding | upstream | 1014002 | 7140362 ~ 7140968 (-) |
| G148962 | NA | non-coding | upstream | 1632322 | 7758682 ~ 7758963 (-) |
| G149002 | NA | non-coding | upstream | 1829612 | 7955972 ~ 7956264 (-) |
| G149030 | NA | non-coding | upstream | 2177459 | 8303819 ~ 8304215 (-) |
| AMCG00000177 | NA | other | downstream | 58610 | 6045665 ~ 6067184 (-) |
| AMCG00000180 | NA | other | downstream | 113157 | 6004186 ~ 6012637 (-) |
| G148395 | NA | other | downstream | 783303 | 5338809 ~ 5342491 (-) |
| AMCG00000161 | NA | other | downstream | 1048548 | 5071467 ~ 5077246 (-) |
| AMCG00000084 | zbtb42,LOC106582697,LOC106610857,LOC103136097,LOC102793331 | other | downstream | 2566893 | 3552159 ~ 3558901 (-) |
| AMCG00000168 | gchfr,LOC106583112 | other | upstream | 24360 | 6150720 ~ 6154301 (-) |
| AMCG00000189 | NA | other | upstream | 81154 | 6207514 ~ 6209957 (-) |
| AMCG00000190 | cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 | other | upstream | 87645 | 6214005 ~ 6216441 (-) |
| G148692 | LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 | other | upstream | 430345 | 6556705 ~ 6563305 (-) |
| G148851 | gpx2 | other | upstream | 1234862 | 7361222 ~ 7362692 (-) |
