AMCG00000182


Basic Information

Item Value
gene id AMCG00000182
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6475441 ~ 6480300 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000182
ttcatttgttttcactcCCTTTTACTAATGGCAGCGGGAGCTTGTGTAAGCAGCCTTGTGGCCGAGCTGCAATGTTCGATCTGCAAGGACATCTTTACTGAGCCCGTCACTGTGGACTGTGGGCATATTTTCTGCCAGGAGTGCCTCACCCAGAAGTGGGAAGGGCAGAAGAGCCGGGCCTGTGCTGTCTGTGGAGAAACCTCCAACTCAGGAGCCCCGCGGTCCAACTACACACTGGCGCGGGTGTCGGCCCTGCTCAGGAGAGAAAGGGCCAGCACAAAACTCTGCCACAAACACAGCCAGGAGCTCGACTTCTTCTGCAAAGAGGAGGATGAAGCCATCTGTTTCATCTGCCAGTTCTCCAGGCAGCATGAGAATCACTGTGTCATCCCGATTGAAAGTGTGCTGGTTGAGTTCAAGAATGAAATGACAGAGAAAATGGAAGAATGTGAAACAGCAAAAGCCAAGTATGAATGTTCTTTGGAGCACATCGAGGAGCAGGCCGCTGCAACGGGAGCTCAGCTGCAACGCGTGGTCGAGGCGACTCAACGGTTTCTGAGCTCCGAGGAGCAGCGAGTGCTGGAGTGcctgaggagagaggaggaggcaCAGCAGGAAGAGATAAAGAAGGAGATACGGTCTGTGAAAGAGGGTCTCGCCATCCTCACAGAGAGTCTGAAGGAGGTCGAGCAAGAACAGGAGACGGGACGAGGTCTGATTCTGAAGAGTTTGCAAGATGTCTGGAAAAGGGTGGATGCCACAAAAACAGCGACTAATAAAGCTCCTTATGAAATGGAAGTGGAGAAGTACCTTAAATCACTTAGTGGCGATGTTTGGGAGAAGATGCTGTCCGCCATAGACACAGCTATGGAACGAGACAGCTGGAGATCGCAGCTCCAGGTGGAGTTATCCTGCAAGGTCTGCCAGCAGCTCATCAATGACCCTGTGACGCTGGAGTGTGGACATGGCTTCTGCAGACTTTGTCTCAGCCAACCCACAGGGGCCCAAGAGGGAACCCGCTGCCCTGACTGTGATCACCTGTCCAGTCCTGATAGCTGTAGACCCGACCGCCTGCTGCAGAGGATTGTGGAAGTATACGTTCAAGAAAACATCACGGCAGAATCGATGCTGGGGCTTCCTGAGTGCTCAGTTCATGAGGAGAGACTGAAGCTCTTCTGTCGTGATCTGCCCTTTCTGTGTCAGGATCAGGCACATACACGCAGGACACGCCTGCTGGCTTTGTTCAACAGCCTCTACCTGCACCTGGGATTGACAGAGCAGGCCCTGCGGCTGGGCGTCAGACACCAGAGGTCCCTGCTGAGGGCTGATCTGGAGGGGAAAGCCAGACTGGCAGAGGCTGCAAAGTGGTCGCTAATGAAAGAGGTTCAGAGAGTGGAGGAATTGGCTGCAGTAAAGGACCTGTTTCTGATGAATGTAAGTCAATCACAGCACATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000182 True 1458 mRNA 0.53 7 6475441 6480300

Neighbor

gene id symbol gene type direction distance location
AMCG00000191 NA coding downstream 187095 6285009 ~ 6288346 (-)
AMCG00000187 NA coding downstream 195897 6260620 ~ 6279544 (-)
AMCG00000188 rad51 coding downstream 217241 6244719 ~ 6258200 (-)
AMCG00000169 NA coding downstream 349081 6125794 ~ 6126360 (-)
AMCG00000179 inf2 coding downstream 405609 6067655 ~ 6069832 (-)
AMCG00000184 NA coding upstream 40727 6521027 ~ 6552330 (-)
AMCG00000205 NA coding upstream 118824 6599124 ~ 6624326 (-)
AMCG00000207 LOC106610840,LOC108430666,LOC105908184,LOC106586878 coding upstream 158279 6638579 ~ 6659202 (-)
AMCG00000206 NA coding upstream 189913 6670213 ~ 6671949 (-)
AMCG00000210 NA coding upstream 378706 6859006 ~ 6861428 (-)
G148610 NA non-coding downstream 327155 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 763565 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 1019952 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 1021193 5451000 ~ 5454248 (-)
G148400 cdca4 non-coding downstream 1095313 5377749 ~ 5380128 (-)
G148801 NA non-coding upstream 660062 7140362 ~ 7140968 (-)
G148962 NA non-coding upstream 1278382 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 1475672 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 1823519 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 2048767 8529067 ~ 8583456 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 259000 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 265484 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 321140 6150720 ~ 6154301 (-)
AMCG00000177 NA other downstream 408257 6045665 ~ 6067184 (-)
AMCG00000180 NA other downstream 462804 6004186 ~ 6012637 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other upstream 76405 6556705 ~ 6563305 (-)
G148851 gpx2 other upstream 880922 7361222 ~ 7362692 (-)
G149011 NA other upstream 1615665 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 2546040 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 2689783 9170083 ~ 9188266 (-)

Expression


Co-expression Network