AMCG00000193


Basic Information

Item Value
gene id AMCG00000193
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6927997 ~ 6935187 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000193
GCGAGATCAATCCCAACATGCTGTGCTCCTGTGTTTGAATGGCGCAGACTCCGCCTGGGCTGGCCGTGAATGTGTATTTCAGTTCCTTCTCTTTTTACACGACTACATCCACTCATTTGTAGTAAATATTGCGGCCATACAGCGAAGGGACAGTATCCATCTTGCGCAAGCGTCCCACGATAAAAGCCTTCCAAAATGTAACGGGTTTTAATCTATTATGGCCTCTGGAGTCCATGATGCAGAAGATAAGGATTTCCAGTATTTTGAGGAAGCTCTATCCAATGAACTTCTCAAACAAAGAATGCTACCTTCTGCTGAGAAGAACATGAAGGAGGtggattgttttaaaaaggaagaTTTAAATAAGAAGAGATCCCCAGTTGGCCATACTGTACACAGCTTCTGTAAAGTGAAAAGGGTGGTGTCCAGCAAGAGGAAGACTCGGCACGTGTCTGGGAACGCTGGCGGACGCCGGAGACAGCCCTCAGGTAGTAGGAGCTGTGACATGGCAAATAAGGAGAATGAACTGGCATGTGCAGACGGCCTGCAGGAGAAACTGCACAATGACAGCTGCGGCTTCCCACTGAGCTCCACAGAGTCCACCAGGATGGACGGCGCAGCCTCCAAATACAGTGATTATTTTGCAGAGATATCAAAGGATCATGAAACAATGACACAAGTGCTTTTTGGAAGAAATCTCAGGCTAAATGTAGCTCTGACCCTTTGGCGAAGGAATGCAAGTGAATTAGTCGCATATCTGATAAGCCTTCAAGATGGGAAGCCTACCATATCTGTCGGCTGTTGTGTGGACCTCTTACCTCTAGTAAAGAATATACTTACAAGTAAATATGAAGAATACCTGGTAGTCGCTCTTCACTGGGTTCAGTCCGTTATTCAAAAATGGTGGCCAGAACTATCGGCAAACAGTAGGAGTGCCCGGGAGAGCCATTCCGAGGATAGGAATATTGGACTCATGAAGCAGCAGTTACTTGAGTTATGGGAGCAGGGAAGACATTTAAGTTTCGTTCCAGGAACTACAGGTGAAATAGCAAAGGTATGTGTTGCAATTTTAACGTATAGGTGCCTTTAAATCAAACCAACCAagaatatttgcattttattgatgGGAGACAAATGCCCTTTAACATTATCACCCTGAGTGGCTGATTAGTACCAATGTTTCAAGCATTGTGCTACGCTGTTATGCTATATGTTTGTCTCCACATTGTGTAGAACAGGACTCCAGAAGCACTACATGTTATTTAGGCCTGAGGAAAGCACAAACTTTGTGAGCAATTACATTAGAAGTAAACTGTTCATTTAAGAGATTCCTTTTCATTCCTCCTTTACTGTGAACATTATTCAATCAGGGTTACCAAAAGTGTCTCCCaagttgttgttcttgttctaAATACCATTGGTGGGAGAAAAAAGCCGACCGAGCAGTCCTGGAGTGTGTTGGAAAGAACCCGCCTCCTGCAGTTGCTGTTTCTGCCTCGGTACACTCTGCTCGTGATGTGTTTAGAGGGTTTCACGCTACAATAAATGATCTAATTGCTTACACACTTCTAACCTGTTGCCTTTTCAgcacaatttgaaatgtattgtccatggtttcacattacattacattcagaTGTGCAATTAAACCATTACATTAAGTCAATTGTACCCCctttgtttctcttctttttctttttgtcttccagacTGTAGAATCCTATTTATTACAGCTGCGCTGATGTATAAATGTAGCACACAGAGGAAGAAACCACTCCAAGCAGTTGCTGCAGTTACAAAGCTGCTTTTCAACTGTACAATGAAGTCTTGAGCCATTACAGGATGTGGCTCCAGGAAAACTGACAGCAGTGGAATTGACAATGAACTGAGAACTCCACTGACACTCCTTACAATTGAATTGAGAATAAACAGTAATGAAAAAGCCTTCCACGAATTGCGAATGACTGCTTCACATTGAAGTGGAAAGCTTGCTAAGGGGCACACATCTGACTCCATGAGGTGAAGAAGACTGATTATATGTCTGAATCCAGGCTGTTCAATAAAGTGCCAAGATATTTTCACTACAGCATTGTTCTTTTTCCACATTCTGTGCATTTATATAGttgaatgtaattaatgtacTTACGTCTCAAAAGTTCTACAGTTGAGGACTTGAAAGTACATCAgaatttttttaagttattagaACTACGTTTGCCTTTGCCTGTTCTTGGGGGGGTAAAAAGCTTGactgtaaaatgtacatacCACTATGTTCTTTTaatcaacaattaaataaatttgcaaagtACTTGGTGTCACGTTATAGAAAACCTTTTAGCCTGTgactttaatgtaatttttacaTGCCAACTTACTACATTATTGTCCTTTGCATATATATGAGTCACCCATATCAAATATATTACCTTTGACTGGCACAAAGATATGGATCCTAATTTCAGGCAGAATTGGGCAGAACAGCATCATGTTTTGTCTTTGGAAGTTTACAAAGGTGTGTAAAATAAGTGGAATACACTTATGAAGTCAAGCAGTTGGTTAATggcattaaaacattaacaaatgtGGTTTCCCAATCCTGCAAGTCCCCTCACTCATACACATGTTGCTTGTGAATCTTTTCATATAAAAATCTTCAGGGTATGGGTCTCCCACTAGCTACACTTAACCAAATTGTGTTGCATGACATTCATTTGGAAGTCTGTGTCAGTCACAATCTTAAACGAGAATAAACATGGatcagttgtttgttttgacgTGAGACTTGAATAACGCTATTGTCTTAAATTTGTAATCTTAAGGAATGCTTCCTTTAGTGGCACTTCTAAGTAACTTGCACTTTTCAAAGCAGAAAATATTagcaataactttttttttttggtttgttttttgtggagagTTAGCGACTGAGGTGGGTATTTCTTTTGAGTGAACTCCcgtatttcatttttagttgCATCTGTTTCTGACGTGATGTAATTTTTATaagctttaataaaaatgtttatgaataaaa

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000193 True 3037 mRNA 0.40 8 6927997 6935187

Neighbor

gene id symbol gene type direction distance location
AMCG00000194 emc7,LOC107721381,LOC107549094,LOC107671783,LOC107601948,LOC107756596 coding downstream 832 6923416 ~ 6927165 (-)
AMCG00000192 chrm5,LOC103025843,LOC103374637,LOC101062455,LOC103136125,LOC106930617,LOC106940597 coding downstream 6321 6916674 ~ 6921676 (-)
AMCG00000210 NA coding downstream 66569 6859006 ~ 6861428 (-)
AMCG00000206 NA coding downstream 256048 6670213 ~ 6671949 (-)
AMCG00000207 LOC106610840,LOC108430666,LOC105908184,LOC106586878 coding downstream 268795 6638579 ~ 6659202 (-)
AMCG00000230 NA coding upstream 277344 7212531 ~ 7225374 (-)
AMCG00000229 NA coding upstream 304577 7239764 ~ 7249352 (-)
AMCG00000231 NA coding upstream 326419 7261606 ~ 7268243 (-)
AMCG00000218 NA coding upstream 361642 7296829 ~ 7303937 (-)
AMCG00000219 LOC108424508,LOC106571088,LOC107668263,LOC105024336,LOC103359368,LOC106608156 coding upstream 390757 7325944 ~ 7336883 (-)
G148610 NA non-coding downstream 779711 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 1216121 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 1472508 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 1473749 5451000 ~ 5454248 (-)
G148400 cdca4 non-coding downstream 1547869 5377749 ~ 5380128 (-)
G148801 NA non-coding upstream 205175 7140362 ~ 7140968 (-)
G148962 NA non-coding upstream 823495 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 1020785 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 1368632 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 1593880 8529067 ~ 8583456 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 364692 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 711556 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 718040 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 773696 6150720 ~ 6154301 (-)
AMCG00000177 NA other downstream 860813 6045665 ~ 6067184 (-)
G148851 gpx2 other upstream 426035 7361222 ~ 7362692 (-)
G149011 NA other upstream 1160778 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 2091153 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 2234896 9170083 ~ 9188266 (-)
G149321 NA other upstream 2552692 9487879 ~ 9488609 (-)

Expression


Co-expression Network