AMCG00000194 (emc7,LOC107721381,LOC107549094,LOC107671783,LOC107601948,LOC107756596)


Basic Information

Item Value
gene id AMCG00000194
gene name emc7,LOC107721381,LOC107549094,LOC107671783,LOC107601948,LOC107756596
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6923416 ~ 6927165 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000194
CTGTAGGATGTGAATGTTTATCATTTATTTCAGACCAAATAATATTGATTAGGATTTGTGATTCTTTACAGTCGGCAGATTACAAACAAAGCCTTTGTTTCCTCCACTGTCGCAATGCTGCCGCGGGCCAGTGCCTCGTTAGCTTGGCTTATTTTCCCAGCTCTATTCACGGCGTCTCGGGGCTTCGGCGACCCGGAGTCGGGGCCTGCTGGGGCCGTAGTCGCCTCCAATGGAGACCGGTTCAGGATTGAAGGCCGGGCGGTGGTGCCGGGAGTCAAGACGCAGGACTGGATCTCCACGGCTCGGGTCTTGGTCGAAGGAGAAGAACATGTTGGCTTTTTAAAGACTGATGGAAGTTTTGCTGTGAACGATGTTCCCTCGGGATCCTATGTTGTAGAGATCATATCACCAGCGTACAGATTTGAGCCAGTTCGTGTGGACATCACATCCAAAGGCAAAATGAGGGCAAGAGTAGTCAATTACATCAAGACATCCGAAGTCCTGCGTTTGCCGTACCCTCTCCAGATGAGGTCTTCCGGCCCACCGTCTTACTTTATGAAGCGGGAGACCTGGGGATGGACAGATTTTCTCATGAACCCAATGGTGATGATGATGGTCCTTCCTTTGCTGATTATTGTCTTGCTGCCTAAAGTTGTCAACACCAATGACCCTGAGATGAGAAGGGAGATGGAGCAATCAATGAATATGCTCAACCCcaaccacgagctgccagacgTCTCCGAGTTCATGACCAAGCTGTTTTCTTCCAAAACCTCCGGCAAGTCAGGGAGTAGCAGTAAAAGTGGCAAAAGTGGGCCACTGAAGAGGAGGTAGTAGACCGAGGAATGTAAAGGCAAAGATGCATTATCTGGCATTACCACATGTcgatattgttttagtttttctctcccctGACTGCTTTTTTGGGCAAATCCAGGCCTTTTGAAACCGTTATACTAAGGTAACTTGTAATGCTGTGAACAACTGCAGATGTTACCTTTCCCACTGACTAGGCCTATTGCGTTCTTGCTCTGTATGACATGCCTGTTGGCTTTCCCTCTTTTCAATGCCTGGTAACCTTTGTGTTTTAgtcttgaaatgtgtgtattgcatCTTGGACAGTTCACCACATGCCATCATCTGATCATTGAAAGCAGGTcccacaatatttaaaaatcttatTTCCATTAAGTTATTTAGCTGTCAATAAGCtactgtaatacatttaatgggTTATGAACCAACTGTTGCAGAGTTGTATATTTTTTCGCAGTGCTTATGATATTTAATATGACTGTAATAAAGCCACATGTACTTGAATAATAGCTTCTATGTCTAAGAAATTCACTAAAGAAGGTTTAAGTTGCCTGCAATGGGTtagaaaagtataatttaaaaaatggtaaaCCTATGACTTTAATTCTAGAATGCAAAATAAGAGATGTTATTTAAGTACAAAGTTAATAAACTTGTGATCCTA

Function

symbol description
emc7 Contributes to membrane insertase activity. Involved in protein insertion into ER membrane by stop-transfer membrane-anchor sequence and tail-anchored membrane protein insertion into ER membrane. Is integral component of endoplasmic reticulum membrane. Part of EMC complex.

NR:

description
ER membrane protein complex subunit 7 precursor

GO:

id name namespace
GO:0072546 endoplasmic reticulum membrane protein complex cellular_component
GO:0030246 carbohydrate binding molecular_function

KEGG:

id description
K23568 EMC7; ER membrane protein complex subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000194 True 1480 mRNA 0.44 5 6923416 6927165

Neighbor

gene id symbol gene type direction distance location
AMCG00000192 chrm5,LOC103025843,LOC103374637,LOC101062455,LOC103136125,LOC106930617,LOC106940597 coding downstream 1740 6916674 ~ 6921676 (-)
AMCG00000210 NA coding downstream 61988 6859006 ~ 6861428 (-)
AMCG00000206 NA coding downstream 251467 6670213 ~ 6671949 (-)
AMCG00000207 LOC106610840,LOC108430666,LOC105908184,LOC106586878 coding downstream 264214 6638579 ~ 6659202 (-)
AMCG00000205 NA coding downstream 299090 6599124 ~ 6624326 (-)
AMCG00000193 NA coding upstream 832 6927997 ~ 6935187 (-)
AMCG00000230 NA coding upstream 285366 7212531 ~ 7225374 (-)
AMCG00000229 NA coding upstream 312599 7239764 ~ 7249352 (-)
AMCG00000231 NA coding upstream 334441 7261606 ~ 7268243 (-)
AMCG00000218 NA coding upstream 369664 7296829 ~ 7303937 (-)
G148610 NA non-coding downstream 775130 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 1211540 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 1467927 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 1469168 5451000 ~ 5454248 (-)
G148400 cdca4 non-coding downstream 1543288 5377749 ~ 5380128 (-)
G148801 NA non-coding upstream 213197 7140362 ~ 7140968 (-)
G148962 NA non-coding upstream 831517 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 1028807 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 1376654 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 1601902 8529067 ~ 8583456 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 360111 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 706975 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 713459 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 769115 6150720 ~ 6154301 (-)
AMCG00000177 NA other downstream 856232 6045665 ~ 6067184 (-)
G148851 gpx2 other upstream 434057 7361222 ~ 7362692 (-)
G149011 NA other upstream 1168800 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 2099175 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 2242918 9170083 ~ 9188266 (-)
G149321 NA other upstream 2560714 9487879 ~ 9488609 (-)

Expression


Co-expression Network