AMCG00000210


Basic Information

Item Value
gene id AMCG00000210
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6859006 ~ 6861428 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000210
GACTCCTTCACCCAGTTTCGattttctgaagaaaaagaaTGGGAAGTGGATGCTTCAGCTAACAATCAGATGTCAGCTCTGTTTGTGGACTGCCAGTCTTTAGCCAGGTCGCTTCAGGAGCTGCCACTGCATGAGAGGTTGAACCTGGAAGCAGAACTGGTGCAGTTAGCGGTTCCGGTGGAGCTGCCCGTGGTGACGTTGAAGAACAAGCAGGACTCCAAGCTTGCTGGTCAGTTCGGCGTCCCCAGCCCCATGAAGACACCCCTGCTTGCGTCTGCTGCACACTCTGCTACCAACGCCGTCTCCAAGACTGTAGACGGGACATCGCTGGACTCCAAACCTCTGGAGGCGTCTCTCGGTGCCGCCCAGCCCCCAGCTGATGACATCGACGAGGATCTTGACATGCTGCTGAATTTAGAAACAGCCGTGCCAACTCCTCCAGACAGCGCTCCATCACGAGCGGACGAGCAGAACACAGCTGGAGTGAAAGCCCCCGCCCCGGAATTGATATCTGAAGGAGCAAAGGAAGAAGAGCCTCCCACTCCTGAAGCAGACATTCCCAAAAAGGACATCACGGAAGATGATCTGGAAGACTGGCTGGACAGCATGATTTCCTGA

Function

GO:

id name namespace
GO:0051301 cell division biological_process

KEGG:

id description
ko03040 Spliceosome
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000210 True 618 mRNA 0.55 4 6859006 6861428

Neighbor

gene id symbol gene type direction distance location
AMCG00000206 NA coding downstream 187057 6670213 ~ 6671949 (-)
AMCG00000207 LOC106610840,LOC108430666,LOC105908184,LOC106586878 coding downstream 199804 6638579 ~ 6659202 (-)
AMCG00000205 NA coding downstream 234680 6599124 ~ 6624326 (-)
AMCG00000184 NA coding downstream 306676 6521027 ~ 6552330 (-)
AMCG00000182 NA coding downstream 378706 6475441 ~ 6480300 (-)
AMCG00000192 chrm5,LOC103025843,LOC103374637,LOC101062455,LOC103136125,LOC106930617,LOC106940597 coding upstream 55246 6916674 ~ 6921676 (-)
AMCG00000194 emc7,LOC107721381,LOC107549094,LOC107671783,LOC107601948,LOC107756596 coding upstream 61988 6923416 ~ 6927165 (-)
AMCG00000193 NA coding upstream 66569 6927997 ~ 6935187 (-)
AMCG00000230 NA coding upstream 351103 7212531 ~ 7225374 (-)
AMCG00000229 NA coding upstream 378336 7239764 ~ 7249352 (-)
G148610 NA non-coding downstream 710720 6147929 ~ 6148286 (-)
G148486 NA non-coding downstream 1147130 5711019 ~ 5711876 (-)
G148417 NA non-coding downstream 1403517 5455246 ~ 5455489 (-)
G148416 NA non-coding downstream 1404758 5451000 ~ 5454248 (-)
G148400 cdca4 non-coding downstream 1478878 5377749 ~ 5380128 (-)
G148801 NA non-coding upstream 278934 7140362 ~ 7140968 (-)
G148962 NA non-coding upstream 897254 7758682 ~ 7758963 (-)
G149002 NA non-coding upstream 1094544 7955972 ~ 7956264 (-)
G149030 NA non-coding upstream 1442391 8303819 ~ 8304215 (-)
G149068 NA non-coding upstream 1667639 8529067 ~ 8583456 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 295701 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 642565 6214005 ~ 6216441 (-)
AMCG00000189 NA other downstream 649049 6207514 ~ 6209957 (-)
AMCG00000168 gchfr,LOC106583112 other downstream 704705 6150720 ~ 6154301 (-)
AMCG00000177 NA other downstream 791822 6045665 ~ 6067184 (-)
G148851 gpx2 other upstream 499794 7361222 ~ 7362692 (-)
G149011 NA other upstream 1234537 8095965 ~ 8106839 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other upstream 2164912 9026340 ~ 9045855 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other upstream 2308655 9170083 ~ 9188266 (-)
G149321 NA other upstream 2626451 9487879 ~ 9488609 (-)

Expression


Co-expression Network