AMCG00000270 (gbg2,gng2,LOC108239039,LOC106603227,LOC107569409)


Basic Information

Item Value
gene id AMCG00000270
gene name gbg2,gng2,LOC108239039,LOC106603227,LOC107569409
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9170083 ~ 9188266 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000270
ATGGCCAGTAACAACACCGCGGGCATTGCCCAGGCCCGGAAACTGGTGGAGCAGCTGAAAATGGAAGCTAACATCGACAGGATAAAGGTATCCAAAGCAGCGGCAGACTTGATGTCTTACTGCGAAGCGCACGCCAAAGAGGATCCATTGCTCTCGCCCGTGCCAGCTTCCGAAAACCCCTTTAGGGAGAAGAAATTCTTCTGTGCCATCCTGTAA
>TU187772
CTATCTGAATCGAGAGGCAGGCTGGGTGGAGACTGAGCTGGGCTGTGCGTTGGAGCTGCTGTCAGCTGGAGCAGTGCTAGGGAGTAAGTGgccgtgtgtgagtgtgtgtgtgtgtgtgtgagagtcgGGGTGTGTGTGGCTACTCCAGGAGACCGTATCGGAGAACACCAGCCCAGGCAagaccacagacagacacaggagaagtggcagggAGCTTTTGGAAAAGGAAGCTGTAAGTGTTGACAGATCCACCTCAACTACAGGCAACTACGCCTCAGGATCTGGTCCAGTGAGAAGACCCTGAAATCAGCAGAATGGCCAGTAACAACACCGCGGGCATTGCCCAGGCCCGGAAACTGGTGGAGCAGCTGAAAATGGAAGCTAACATCGACAGGATAAAGGTATCCAAAGCAGCGGCAGACTTGATGTCTTACTGCGAAGCGCACGCCAAAGAGGATCCATTGCTCTCGCCCGTGCCAGCTTCCGAAAACCCCTTTAGGGAGAAGAAATTCTTCTGTGCCATCCTGTAAAGGCACTGGACGCTGAACATGTAGAATTTTGTAGCCGAGGCACGGCGGACGCCTTCTCAAGTCCTCGCAAACAGTGTGCGATTAAACAAgtaacacataattaaaaaaaaaaaaaaaaaaagtctgggcGCTACAGTGGTGTGCATGTTTTAAAGGAATCTTGTGGTTTCAAGGGGAATGAAGACCCTGAAACATGAATTACACAAAAAAGTGAGTCTTCAAGGTGTGTAGGATAGAAGCCCTTATTGACTGATGTAGagttgtaaaaaacaaaaaacagattaacATTTTGTGGTtcctttgaataaataaatatatatatattatatacacacacacataaatacaaggTGAAGTTTTGATAGATTAATGATAAATACGAAAGTTCTGATAAAGCAAGCTTAACGCTGGGGACGGCATTTTTATtggaatgttttttaatgttatgtttattttttaagtttattggGTATATTGAAGAGATAGCTTTCTGTTATGTGATAACTTATTTTGGTTATGtacacttttttattgtatatcaATAGATtagcaaaacactttttttaagataaaaagTTTGAGAGAAGTAAGAAGTTTCAAAGAAGTAACTTTCTTTGCAATTACAtatcttaaaaacagaaaaagctgGCTATGtgagtttgttttctaaagatACTAGCTCTCTTTATAACATTTGTATACAACTGCTATTAAGTGACCTGTGTTGTGCTCAGTGCTGTTTGTGGTGATTATATTGCATGGACAAGCTCATccctcttttttctttcagtgttgAGATTGTTAATGGAAAGGCAGTGATGATATATTTCTCTAACCTGGTTGGCCAAGAGTATATTAAACTGACAAAAAGCTCAACAAGACCTGACAAGACTTCTCTGTTGTATCATTAACCTGTTTTACCCAGGCTATGCTTGGTGTGTGTGGTACAGTACCTTCTGTGTTAATGGTTTAAACAGTAGTTGTGCCTCAGTATAACGTTTACCTCACTATACAAGATGAAAAGCTCTATATTCCTGACACTTGTCCTCCATTGCAAACATCTTTTGGAGGTTTTCatgtttgtcatttattattaacagGACTTTGCACTGGAGGTGACGTTTAGCACAGGTAGCTTAAATATTGAGAAACCAGCTGGGATTAATGTCAATCAACATCACGTCAAACATCAAGTGATTAATTCTCAGTGCAGGgcttttttctctgtatttatgCAGCGTTACACTTCTTAAGAATATCATGCTCctgatttagtttttccc

Function

symbol description
gng2 Predicted to enable G-protein beta-subunit binding activity. Acts upstream of or within sprouting angiogenesis and vascular endothelial growth factor receptor signaling pathway. Located in cytosol and membrane. Is expressed in cardiovascular system and nervous system. Orthologous to human GNG2 (G protein subunit gamma 2).

NR:

description
Guanine nucleotide-binding protein GI/GS/GO subunit gamma-2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0002040 sprouting angiogenesis biological_process
GO:0048010 vascular endothelial growth factor receptor signaling pathway biological_process
GO:0005829 cytosol cellular_component
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000270 False 216 mRNA 0.53 2 9171366 9172152
TU187772 True 1813 lncRNA 0.40 4 9170083 9188266

Neighbor

gene id symbol gene type direction distance location
AMCG00000269 cunh14orf166,zgc:56576,LOC107725214,LOC107680004,LOC107693089,LOC107583671 coding downstream 4446 9157860 ~ 9165637 (-)
AMCG00000267 NA coding downstream 53415 9108437 ~ 9116668 (-)
AMCG00000268 NA coding downstream 70606 9093090 ~ 9099477 (-)
AMCG00000263 psmc6,prs10,LOC107668141,LOC107582103,LOC107549540 coding downstream 152143 9011195 ~ 9017940 (-)
AMCG00000261 styx,LOC107680756,LOC107723651,LOC106602923 coding downstream 160606 9004531 ~ 9009477 (-)
AMCG00000272 frmd6,LOC102777289 coding upstream 6351 9194617 ~ 9210651 (-)
AMCG00000275 NA coding upstream 96092 9284358 ~ 9289212 (-)
AMCG00000276 NA coding upstream 175904 9364170 ~ 9370779 (-)
AMCG00000279 atl1 coding upstream 239233 9427499 ~ 9439336 (-)
AMCG00000289 NA coding upstream 310454 9498720 ~ 9501150 (-)
G149132 NA non-coding downstream 224495 8882648 ~ 8945588 (-)
G149125 NA non-coding downstream 318304 8851316 ~ 8851779 (-)
G149087 NA non-coding downstream 425584 8743871 ~ 8744499 (-)
G149077 stxbp6 non-coding downstream 430099 8669016 ~ 8739984 (-)
G149075 NA non-coding downstream 594997 8573082 ~ 8575086 (-)
G149268 pygl,LOC104938237 non-coding upstream 173066 9361332 ~ 9363435 (-)
G149322 NA non-coding upstream 302003 9490269 ~ 9490806 (-)
G149324 NA non-coding upstream 305893 9494159 ~ 9496132 (-)
G149325 NA non-coding upstream 307967 9496233 ~ 9496585 (-)
G149326 LOC107379822 non-coding upstream 308581 9496847 ~ 9497214 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 124228 9026340 ~ 9045855 (-)
G149011 NA other downstream 1063244 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 1807391 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2606778 6556705 ~ 6563305 (-)
AMCG00000190 cyp1c1,cyp1c3,cyp1c2,LOC107745367,LOC106610849 other downstream 2953642 6214005 ~ 6216441 (-)
G149321 NA other upstream 299613 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 352345 9540611 ~ 9541259 (-)
G149395 NA other upstream 568115 9756381 ~ 9766794 (-)
G149402 NA other upstream 643489 9831755 ~ 9832133 (-)
G149441 NA other upstream 742704 9930970 ~ 9935550 (-)

Expression


Co-expression Network