AMCG00000275


Basic Information

Item Value
gene id AMCG00000275
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9284358 ~ 9289212 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000275
CTGGCCGGTGGTGCGCGCAGCCGCAGTTGCGAGCGCCGCCAGGGGAAGGACTCGGCCGGGGTGAACGGAAGCGGAGGAGCGGCGAGGCTGGCTCTGAACATGGCGGCCTTGCAAACCTGCCGACGAATGGCAGCGGCGAGACTCTGCTGCTCCCTGGGCTTCCTCCTGACAGCAGCAACAGTGGCGGTCATCGCCCTGGCGCCGCAGCCGGCACTGGGCAAGAAGAGCCATCTGCGGGTGATCACGGACGGGAACTGGCAGGAGATCCTGGAGGGAGAGTGGATGATAGAGTTCTTCGCTCCCTGGTGCCCGGCCTGCCAGCAGCTCCAGCCCGTGTGGAACGAGTTTGCCGAGTGGGGGGAGGACATGGGGGTCAGCATTGCCAAAGTGGACGTCACGGAGCAGCCAGGTCTGAGCGGCCGCTTCATCATCACAGCGCTTCCCACCATCTACCACTGTAAAGATGGGGTGTTTCGGAGGTACCAGGGCGCCCGCACGAAGGATGACTTCCTGAGTTTCATCGATGAGAAGAAATGGCAGGACATCGAGCCGCATTGCCACAATTACTTCACAGAACAAATCGGGATCCCAGTGTGGGGGTCGTACGCAATCTTTGCCCTCGCCACGCTTTTCTCTGGCCTGGTGTTAGGACTGGTCCTCGTGTTCATCGCCGACTGTGTCTTCCCATCCCGTCGCTTTGCTCCACCGAATTACTACCAGAAAAAGCAGGCCCTGGAGCAGGCCCGACTGAGGAAGAGGATGGAGGATGAGCAGGAGGCTGACGGAGAAGAGGACGAGGAGGACGAGGATGAGTTCGAGGACGACGGCGGTCGGGAGCTGTGGCGGAGGAGAGCCCAGCACAGATCCCGGGAGGCGGAGCAGAGGCAAgcacagagccagagagagcCGGCGCCCcggagagagaggctggacgCCCAGCTGGAGAGCTCCCCCGAGGCCCTGCGCAAGAGAACCCCCGCTGCCCAAGAGGAGGACACCTAaaggcggggaggaggaactgCAGACGGCCTTAGCAGCGTGAACACACTGCGGTGCTTCAAACTCCCTGCCGGGCAGCTTGCAGGCAGTGCACCTGGAGCTGACCCCGCCAGCTGCctgtctgtgtccctgtctgtctgtctgtctggtggGAGGGTGCTGACACCTTCCACTGGGACATCTGTATCAGAGAAGCATGTTCTCTTCACAGAAACTAACCGCGTTCATCCGCTGTTCTTTTAAACCAAGAAAGTTTTCATAATCTTTTAAGGGGAATTTAGTTAAGCAATTATTTAggatttgtgtatatatatatatatatgtatgtatgtgtgtgtgtgtgtgtgtgtatatatata

Function

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000275 True 1358 mRNA 0.59 7 9284358 9289212

Neighbor

gene id symbol gene type direction distance location
AMCG00000272 frmd6,LOC102777289 coding downstream 73707 9194617 ~ 9210651 (-)
AMCG00000269 cunh14orf166,zgc:56576,LOC107725214,LOC107680004,LOC107693089,LOC107583671 coding downstream 118721 9157860 ~ 9165637 (-)
AMCG00000267 NA coding downstream 167690 9108437 ~ 9116668 (-)
AMCG00000268 NA coding downstream 184881 9093090 ~ 9099477 (-)
AMCG00000263 psmc6,prs10,LOC107668141,LOC107582103,LOC107549540 coding downstream 266418 9011195 ~ 9017940 (-)
AMCG00000276 NA coding upstream 74958 9364170 ~ 9370779 (-)
AMCG00000279 atl1 coding upstream 138287 9427499 ~ 9439336 (-)
AMCG00000289 NA coding upstream 209508 9498720 ~ 9501150 (-)
AMCG00000290 NA coding upstream 263030 9552242 ~ 9553191 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 274183 9563395 ~ 9570360 (-)
G149132 NA non-coding downstream 338770 8882648 ~ 8945588 (-)
G149125 NA non-coding downstream 432579 8851316 ~ 8851779 (-)
G149087 NA non-coding downstream 539859 8743871 ~ 8744499 (-)
G149077 stxbp6 non-coding downstream 544374 8669016 ~ 8739984 (-)
G149075 NA non-coding downstream 709272 8573082 ~ 8575086 (-)
G149268 pygl,LOC104938237 non-coding upstream 72120 9361332 ~ 9363435 (-)
G149322 NA non-coding upstream 201057 9490269 ~ 9490806 (-)
G149324 NA non-coding upstream 204947 9494159 ~ 9496132 (-)
G149325 NA non-coding upstream 207021 9496233 ~ 9496585 (-)
G149326 LOC107379822 non-coding upstream 207635 9496847 ~ 9497214 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 96092 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 238503 9026340 ~ 9045855 (-)
G149011 NA other downstream 1177519 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 1921666 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2721053 6556705 ~ 6563305 (-)
G149321 NA other upstream 198667 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 251399 9540611 ~ 9541259 (-)
G149395 NA other upstream 467169 9756381 ~ 9766794 (-)
G149402 NA other upstream 542543 9831755 ~ 9832133 (-)
G149441 NA other upstream 641758 9930970 ~ 9935550 (-)

Expression


Co-expression Network