AMCG00000276


Basic Information

Item Value
gene id AMCG00000276
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9364170 ~ 9370779 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000276
GCAATGGCGCCCTGCTGTTTCAGGGGGGTCTCCGTGCGGGCCGGTGCAGTGCAGTCTGAGGACCCTAACCTTTCACCGCTATTCGTGACGTTGACAGCCGCTCTCTGTGCCACTCAGACTCGCCCTGCGGCAGCGGACAGCTAGACAAtgaggaaaagaaacaacagcCATGGGTCCAAAACAGCCGGGGAGAAGTCTTCCAGCGGCAGGACGAGGAGGGCCAGGGCAGCCGAGAGCAGGGCGGCCGAGGCGGGCGAGCTGAGCACGTCTGGGTCTGGCTGGTTGTCGAGGACTAAAACACTCCTTTTCACCGTGTTTGTTGTTTACTCCTCTGTGCCTTTCATCATCCGTCTGTTCCCAGGAATACTGGCCCAGGTGGTCTATTCTCATTACGTCAGAGTGCCGTTCTTTGTGGATCTTGGGCGTCCAGCTGACCTCTTCCTGAACCATACACTCAACTTCTACCTCATACCCGAAGATGGAGTCACAGTGGGCGTCTGCCAGTGGCAGCAGGCCCAGGGGAAAGGCCTGGGGTGGTATGAGGCATCGCTAGGAGACAGCGCTCCTGTTATCATCTACCTCCATGGCAATGGGGGCACCAGGGCGACAGATCACCGGGTCCAGCTCATAAAAGTCCTCAGTGCTGCTGAGTTCCACGTTCTCGCTCTGGATTATAGAGGTTTTGGTGACTCTACAGGGCAACCCAGTGAGCTGGGCATGACAACCGATGCCCTCCATCTGTACCGCTGGGTGAAGGCAAACAGTGGGGGCAGCCCTGTCTATCTGTGGGGGCATTCCCTTGGCACAGGAGTGGCTACCAATGCTGCACGGAAACTACAAGAGCTGGGGAGTCAGGTTGATGCTGTGATCCTCGAGGCCCCGTACACCAACATACGTGAGGAGGTAGCCAACCACCCTCTGGGCCTGATCTATTGTCTGTTTCCAGCTTTTGAGTACTTTTTCCTGGACACTGTGGCACTAAACAACATAGTCTTTCCTAATGATGAAAACCTGAAGATGGTGAGCAGCCCTCTTATGATTTTGCATGCTGAGGATGACAGGGTGGTCCCTTTCCACATGAGCAAGCAGCTGTATGACATAGCGCTGCAGTCCCAGGCCTCCAAGGGCAAAGTCAAGCTGGTCCCTTTCAGCCGGTCCCTTGGTTACGGGCACAACAGAATCTTCCAGGACCCCAATCTGCCGAGCATCCTGCGGTGA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13704 ABHD12; abhydrolase domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000276 True 1218 mRNA 0.56 12 9364170 9370779

Neighbor

gene id symbol gene type direction distance location
AMCG00000275 NA coding downstream 74958 9284358 ~ 9289212 (-)
AMCG00000272 frmd6,LOC102777289 coding downstream 153519 9194617 ~ 9210651 (-)
AMCG00000269 cunh14orf166,zgc:56576,LOC107725214,LOC107680004,LOC107693089,LOC107583671 coding downstream 198533 9157860 ~ 9165637 (-)
AMCG00000267 NA coding downstream 247502 9108437 ~ 9116668 (-)
AMCG00000268 NA coding downstream 264693 9093090 ~ 9099477 (-)
AMCG00000279 atl1 coding upstream 56720 9427499 ~ 9439336 (-)
AMCG00000289 NA coding upstream 127941 9498720 ~ 9501150 (-)
AMCG00000290 NA coding upstream 181463 9552242 ~ 9553191 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 192616 9563395 ~ 9570360 (-)
AMCG00000284 ccdc177,LOC103144771,LOC106922444,LOC102219675,LOC102789726 coding upstream 392836 9763615 ~ 9765768 (-)
G149268 pygl,LOC104938237 non-coding downstream 735 9361332 ~ 9363435 (-)
G149132 NA non-coding downstream 418582 8882648 ~ 8945588 (-)
G149125 NA non-coding downstream 512391 8851316 ~ 8851779 (-)
G149087 NA non-coding downstream 619671 8743871 ~ 8744499 (-)
G149077 stxbp6 non-coding downstream 624186 8669016 ~ 8739984 (-)
G149322 NA non-coding upstream 119490 9490269 ~ 9490806 (-)
G149324 NA non-coding upstream 123380 9494159 ~ 9496132 (-)
G149325 NA non-coding upstream 125454 9496233 ~ 9496585 (-)
G149326 LOC107379822 non-coding upstream 126068 9496847 ~ 9497214 (-)
G149332 NA non-coding upstream 139346 9510125 ~ 9511350 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 175904 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 318315 9026340 ~ 9045855 (-)
G149011 NA other downstream 1257331 8095965 ~ 8106839 (-)
G148851 gpx2 other downstream 2001478 7361222 ~ 7362692 (-)
G148692 LOC107756589,LOC107552947,LOC107682372,LOC100534413,LOC105015666 other downstream 2800865 6556705 ~ 6563305 (-)
G149321 NA other upstream 117100 9487879 ~ 9488609 (-)
G149341 sos2 other upstream 169832 9540611 ~ 9541259 (-)
G149395 NA other upstream 385602 9756381 ~ 9766794 (-)
G149402 NA other upstream 460976 9831755 ~ 9832133 (-)
G149441 NA other upstream 560191 9930970 ~ 9935550 (-)

Expression


Co-expression Network