AMCG00000290


Basic Information

Item Value
gene id AMCG00000290
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9552242 ~ 9553191 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000290
AGGAGACAGTTGGCTGCCCTGGAGCTGCTCCGGTCTGAGGAGCAGTATGTGTCCAGCCTGGGTCAGCTCCACATCGTGTACAATGCAGCCCTAGCCCCACTGCCAGAGGCCCAGGACCTCTGTCAGGCGTTTCTTGCCAACCTGGAGCAGCTGTCACAGCGCCACCTGCTCTTCAGAAACATGCTGGAGGAACGCATCTCCAGCTGGCAGTGGCGAGGCCTCCTAGGAGACGTGTGTGCCCAGCTCACCAGCCTCGACGACAGTGACACTTTGGACCTGTACCTGACCTACATCCGGATGTTCCCAACATTCCTTCCCCAATCAGAGAATGAGACGCACAAGACACAGGGCACAgtggggcaggaggaggagctggaccTGGTCTCCCTGATCCTGGCGCCAGTCACCAGGATCCACAGCTACCTGCCACACATCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000290 True 438 mRNA 0.60 4 9552242 9553191

Neighbor

gene id symbol gene type direction distance location
AMCG00000289 NA coding downstream 51092 9498720 ~ 9501150 (-)
AMCG00000279 atl1 coding downstream 112906 9427499 ~ 9439336 (-)
AMCG00000276 NA coding downstream 181463 9364170 ~ 9370779 (-)
AMCG00000275 NA coding downstream 263030 9284358 ~ 9289212 (-)
AMCG00000272 frmd6,LOC102777289 coding downstream 341591 9194617 ~ 9210651 (-)
AMCG00000291 cnih1,LOC107736564,LOC107683416,LOC107553211,LOC106611446 coding upstream 10204 9563395 ~ 9570360 (-)
AMCG00000284 ccdc177,LOC103144771,LOC106922444,LOC102219675,LOC102789726 coding upstream 210424 9763615 ~ 9765768 (-)
AMCG00000309 NA coding upstream 368128 9921319 ~ 9925304 (-)
AMCG00000312 plekhd1 coding upstream 389234 9942425 ~ 9955020 (-)
AMCG00000308 LOC101074829,LOC107664419 coding upstream 407703 9960894 ~ 9970582 (-)
G149346 NA non-coding downstream 7328 9544667 ~ 9544914 (-)
G149344 NA non-coding downstream 8212 9543587 ~ 9544030 (-)
G149343 sos2,LOC106611443 non-coding downstream 9466 9542512 ~ 9542776 (-)
G149340 NA non-coding downstream 15148 9536829 ~ 9537094 (-)
G149339 NA non-coding downstream 15706 9536312 ~ 9536536 (-)
G149367 NA non-coding upstream 18943 9572134 ~ 9574131 (-)
G149391 NA non-coding upstream 191573 9744764 ~ 9747106 (-)
G149414 NA non-coding upstream 341355 9894546 ~ 9897750 (-)
G149438 NA non-coding upstream 366721 9919912 ~ 9921022 (-)
G149532 NA non-coding upstream 1041535 10594726 ~ 10594935 (-)
G149341 sos2 other downstream 10983 9540611 ~ 9541259 (-)
G149321 NA other downstream 63633 9487879 ~ 9488609 (-)
AMCG00000270 gbg2,gng2,LOC108239039,LOC106603227,LOC107569409 other downstream 363976 9170083 ~ 9188266 (-)
AMCG00000260 gpr137c,LOC107583456,LOC107693135,LOC107723581,LOC107564956,LOC107751764,LOC106610616 other downstream 506387 9026340 ~ 9045855 (-)
G149011 NA other downstream 1445403 8095965 ~ 8106839 (-)
G149395 NA other upstream 203190 9756381 ~ 9766794 (-)
G149402 NA other upstream 278564 9831755 ~ 9832133 (-)
G149441 NA other upstream 377779 9930970 ~ 9935550 (-)
AMCG00000300 NA other upstream 476536 10029727 ~ 10059000 (-)
AMCG00000334 NA other upstream 2233898 11787089 ~ 11808825 (-)

Expression


Co-expression Network