AMCG00000302


Basic Information

Item Value
gene id AMCG00000302
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 10073813 ~ 10077565 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000302
ATGGACACAGCTCAGAGGCAAAACACCACTGTGAAAGAAGGGTTCCTGGTTAAGCGGGGGCATGTCATCCAGAACTGGAAGGCGCGCTGGTTTGTGCTGCTGCCAGACGAGCTCCTCTATTACAAGTATGATGGTGGCAAAAAGGATTCAAGTCTGCGGGGCAAGGTGGCCCTGGCAGGGTGCAAAGTCACCTGTCCCTGCTTAGAATATCAGAACAGACCGCTGGTGATCAAACTGAAGACACAGAAGTCAGCAGAGTATTTTCTCGAAGCCTGTTCCCGGGAGGAGCGGGACGCATGGGCTGCCAGCATCACAAGCACAATCCAAAACCTGCGCCCAGACTCAGCCCAGAAGCCCCTGTCTGAACATGCTCATCTAGAGCTCAACAATGTTAGCCTCAATCAGGTGGTGGATTCAATGCATGATGTTCATAGTGGAGTCAAACTGGTAAACCACATGGAGCAAGGCAGCTCTTTCAAGAAATGCTTCTCAGGTGCTGCTCTGGTGGACTGGCTGGTGTCTATGGGTTTTGTACTGACTCGTGTGGAGGCGGTCACCCTGTCATCTGCTCTGATGGAGGAGAACTTTGTGAAGCCAATGGGAATCAAGAGTGTGGATGCCAGCAGAGTTGGGAATATGACAGAGCAGTTTTTGGATGACTCGACAGCGCTCTATGCATTCGCAGAAAGCTATAAGCGAAAAGGCAGTGTGAAGGCAGAGccatctctctctgctgtggacctcagtgggaaggtggTGAAGAGGGGGTACCTGCTGAAACAAGGtcacaaaaggaaaaactgGAAGGTGCGGTTATTTGTACTGAGGGCGGAGCCAGGGTTCCTGCACTACTTTGATCCCAGCAGGGTAAGTGTCAAAGGCAATGTTCAAGGcaatcttttcaaaataattactcAGAATGACACTCACTACTTCATTCAAGCCACATCCAAGGAAGAAAAGATGGAATGGATTCTTGCCATAAAGCAGCTGACTTAG

Function

GO: NA

KEGG:

id description
K19993 PLEK; pleckstrin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000302 True 999 mRNA 0.50 8 10073813 10077565

Neighbor

gene id symbol gene type direction distance location
AMCG00000303 NA coding downstream 45500 10025629 ~ 10028313 (-)
AMCG00000311 NA coding downstream 52717 10010136 ~ 10021096 (-)
AMCG00000310 rbm25,LOC103353665 coding downstream 76347 9972987 ~ 9997466 (-)
AMCG00000308 LOC101074829,LOC107664419 coding downstream 103231 9960894 ~ 9970582 (-)
AMCG00000312 plekhd1 coding downstream 118793 9942425 ~ 9955020 (-)
AMCG00000298 eif2s1,eif2s1b coding upstream 5742 10083307 ~ 10090818 (-)
AMCG00000301 mpp5,LOC107657730,LOC107752770,LOC105026062,LOC107592802,LOC106611266 coding upstream 26936 10104501 ~ 10114810 (-)
AMCG00000299 NA coding upstream 47697 10125262 ~ 10127956 (-)
AMCG00000296 gphna,LOC107752769,LOC107657705 coding upstream 84144 10161709 ~ 10209228 (-)
AMCG00000295 LOC108443923,LOC108270253 coding upstream 201244 10278809 ~ 10293472 (-)
G149438 NA non-coding downstream 152791 9919912 ~ 9921022 (-)
G149414 NA non-coding downstream 176063 9894546 ~ 9897750 (-)
G149391 NA non-coding downstream 326707 9744764 ~ 9747106 (-)
G149367 NA non-coding downstream 499682 9572134 ~ 9574131 (-)
G149346 NA non-coding downstream 528899 9544667 ~ 9544914 (-)
G149532 NA non-coding upstream 517161 10594726 ~ 10594935 (-)
G149539 NA non-coding upstream 634912 10712477 ~ 10712681 (-)
G149567 NA non-coding upstream 1055836 11133401 ~ 11134191 (-)
G149573 NA non-coding upstream 1098116 11175681 ~ 11176066 (-)
G149596 NA non-coding upstream 1260826 11338391 ~ 11368231 (-)
AMCG00000300 NA other downstream 14813 10029727 ~ 10059000 (-)
G149441 NA other downstream 138263 9930970 ~ 9935550 (-)
G149402 NA other downstream 241680 9831755 ~ 9832133 (-)
G149395 NA other downstream 307019 9756381 ~ 9766794 (-)
G149341 sos2 other downstream 532554 9540611 ~ 9541259 (-)
AMCG00000334 NA other upstream 1709524 11787089 ~ 11808825 (-)
AMCG00000336 NA other upstream 1762915 11840480 ~ 11847948 (-)
G149751 NA other upstream 2003978 12081543 ~ 12083214 (-)
G149847 NA other upstream 2444955 12522520 ~ 12542310 (-)
G150138 NA other upstream 3746389 13823954 ~ 13826709 (-)

Expression


Co-expression Network