Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000303 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10025629 ~ 10028313 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K11153 | RDH12; retinol dehydrogenase 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000303 | True | 750 | mRNA | 0.55 | 4 | 10025629 | 10028313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000311 | NA | coding | downstream | 4533 | 10010136 ~ 10021096 (-) |
| AMCG00000310 | rbm25,LOC103353665 | coding | downstream | 28163 | 9972987 ~ 9997466 (-) |
| AMCG00000308 | LOC101074829,LOC107664419 | coding | downstream | 55047 | 9960894 ~ 9970582 (-) |
| AMCG00000312 | plekhd1 | coding | downstream | 70609 | 9942425 ~ 9955020 (-) |
| AMCG00000309 | NA | coding | downstream | 100325 | 9921319 ~ 9925304 (-) |
| AMCG00000302 | NA | coding | upstream | 45500 | 10073813 ~ 10077565 (-) |
| AMCG00000298 | eif2s1,eif2s1b | coding | upstream | 54994 | 10083307 ~ 10090818 (-) |
| AMCG00000301 | mpp5,LOC107657730,LOC107752770,LOC105026062,LOC107592802,LOC106611266 | coding | upstream | 76188 | 10104501 ~ 10114810 (-) |
| AMCG00000299 | NA | coding | upstream | 96949 | 10125262 ~ 10127956 (-) |
| AMCG00000296 | gphna,LOC107752769,LOC107657705 | coding | upstream | 133396 | 10161709 ~ 10209228 (-) |
| G149438 | NA | non-coding | downstream | 104607 | 9919912 ~ 9921022 (-) |
| G149414 | NA | non-coding | downstream | 127879 | 9894546 ~ 9897750 (-) |
| G149391 | NA | non-coding | downstream | 278523 | 9744764 ~ 9747106 (-) |
| G149367 | NA | non-coding | downstream | 451498 | 9572134 ~ 9574131 (-) |
| G149346 | NA | non-coding | downstream | 480715 | 9544667 ~ 9544914 (-) |
| G149532 | NA | non-coding | upstream | 566413 | 10594726 ~ 10594935 (-) |
| G149539 | NA | non-coding | upstream | 684164 | 10712477 ~ 10712681 (-) |
| G149567 | NA | non-coding | upstream | 1105088 | 11133401 ~ 11134191 (-) |
| G149573 | NA | non-coding | upstream | 1147368 | 11175681 ~ 11176066 (-) |
| G149596 | NA | non-coding | upstream | 1310078 | 11338391 ~ 11368231 (-) |
| G149441 | NA | other | downstream | 90079 | 9930970 ~ 9935550 (-) |
| G149402 | NA | other | downstream | 193496 | 9831755 ~ 9832133 (-) |
| G149395 | NA | other | downstream | 258835 | 9756381 ~ 9766794 (-) |
| G149341 | sos2 | other | downstream | 484370 | 9540611 ~ 9541259 (-) |
| G149321 | NA | other | downstream | 537020 | 9487879 ~ 9488609 (-) |
| AMCG00000300 | NA | other | upstream | 1414 | 10029727 ~ 10059000 (-) |
| AMCG00000334 | NA | other | upstream | 1758776 | 11787089 ~ 11808825 (-) |
| AMCG00000336 | NA | other | upstream | 1812167 | 11840480 ~ 11847948 (-) |
| G149751 | NA | other | upstream | 2053230 | 12081543 ~ 12083214 (-) |
| G149847 | NA | other | upstream | 2494207 | 12522520 ~ 12542310 (-) |
