Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000318 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10858755 ~ 10861525 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0036071 | N-glycan fucosylation | biological_process |
| GO:0033578 | protein glycosylation in Golgi | biological_process |
| GO:0032580 | Golgi cisterna membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008424 | glycoprotein 6-alpha-L-fucosyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000318 | True | 207 | mRNA | 0.52 | 2 | 10858755 | 10861525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000317 | LOC107733188,LOC106611223,LOC106602554,LOC108433921,LOC108270174 | coding | downstream | 31767 | 10814984 ~ 10826988 (-) |
| AMCG00000316 | LOC106571665 | coding | downstream | 75032 | 10780110 ~ 10783723 (-) |
| AMCG00000295 | LOC108443923,LOC108270253 | coding | downstream | 565283 | 10278809 ~ 10293472 (-) |
| AMCG00000296 | gphna,LOC107752769,LOC107657705 | coding | downstream | 649527 | 10161709 ~ 10209228 (-) |
| AMCG00000299 | NA | coding | downstream | 730799 | 10125262 ~ 10127956 (-) |
| AMCG00000319 | NA | coding | upstream | 345924 | 11207449 ~ 11210136 (-) |
| AMCG00000320 | NA | coding | upstream | 359395 | 11220920 ~ 11221514 (-) |
| AMCG00000349 | NA | coding | upstream | 449234 | 11310759 ~ 11473260 (-) |
| AMCG00000322 | NA | coding | upstream | 775215 | 11636740 ~ 11637036 (-) |
| AMCG00000321 | LOC105356882 | coding | upstream | 801332 | 11662857 ~ 11669320 (-) |
| G149539 | NA | non-coding | downstream | 146074 | 10712477 ~ 10712681 (-) |
| G149532 | NA | non-coding | downstream | 263820 | 10594726 ~ 10594935 (-) |
| G149438 | NA | non-coding | downstream | 937733 | 9919912 ~ 9921022 (-) |
| G149414 | NA | non-coding | downstream | 961005 | 9894546 ~ 9897750 (-) |
| G149391 | NA | non-coding | downstream | 1111649 | 9744764 ~ 9747106 (-) |
| G149567 | NA | non-coding | upstream | 271876 | 11133401 ~ 11134191 (-) |
| G149573 | NA | non-coding | upstream | 314156 | 11175681 ~ 11176066 (-) |
| G149596 | NA | non-coding | upstream | 476866 | 11338391 ~ 11368231 (-) |
| G149603 | NA | non-coding | upstream | 575842 | 11437367 ~ 11437819 (-) |
| G149616 | NA | non-coding | upstream | 665345 | 11526870 ~ 11527092 (-) |
| AMCG00000300 | NA | other | downstream | 799755 | 10029727 ~ 10059000 (-) |
| G149441 | NA | other | downstream | 923205 | 9930970 ~ 9935550 (-) |
| G149402 | NA | other | downstream | 1026622 | 9831755 ~ 9832133 (-) |
| G149395 | NA | other | downstream | 1091961 | 9756381 ~ 9766794 (-) |
| G149341 | sos2 | other | downstream | 1317496 | 9540611 ~ 9541259 (-) |
| AMCG00000334 | NA | other | upstream | 925564 | 11787089 ~ 11808825 (-) |
| AMCG00000336 | NA | other | upstream | 978955 | 11840480 ~ 11847948 (-) |
| G149751 | NA | other | upstream | 1220018 | 12081543 ~ 12083214 (-) |
| G149847 | NA | other | upstream | 1660995 | 12522520 ~ 12542310 (-) |
| G150138 | NA | other | upstream | 2962429 | 13823954 ~ 13826709 (-) |
