AMCG00000337


Basic Information

Item Value
gene id AMCG00000337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 11814939 ~ 11829846 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000337
ATGCTTTTTCAAGTGTTCAGAgAGCTGCAGTTCACGAAGAACCCCACTAACTTGACCGTGTCCCAGGGCAACTCGGCCCGCCTGCAGTGCGCCGTACAGGGGCTGAGTGAGCCCGAGATCTTCTGGATGAAGGACGGGGAGAAACTCTACAGCACCGACCAGATGTATATCAACCTGGATCAGGACCACTGGGCGACCTTCCACAGTGTGAAATCTGTCCAGCAGACGGATGCTGGGAAGTACTGGTGTGTGGCTGAGTTCAACGGCGTCAGTGTGTCCTCGGCGCCGGCCTGGATCAATGTGGAAGGTGTGCCGCACTTTGTGCTGGAGCCCCAGGATGTGGCCACGCTGCCCAGCATGCCCTTTAACCTGAGCTGCGAGGCCGTGGGCCCCCCAGAGCCAGTGGAGGTGGTGTGGTGGGTGGACGGGGCGCCGATGGGAGAGCCTGGTCCCTCAAAGTCTGTACTCCCCATCCCTGGAGTCACCCAGAGCATCAAGTTCTACTGTGAAGCCAAGAACACCAGGGGAATCTCGGTGTCCCGCACAGGCACCGTGCACATCAAAGtTCCCCCAGAAGCCCCAAGCGCAGTGCAAGTGATCGAGGTGCAGCAGAATAACGTCACCCTGTCCTGGACCCCTGGTTTCACTGGACACTCGGCTCTGAATGCCTGCACCATACAGGTATCACAGAACTCCGGAGAGGGGGTGGAGCTTCCAGAGTATCATGTGACCGTGCCTCCTTTCCAGCAGCTCATTGGAGGCCTGAAGTGCTTCTCAAACTACAGTGCACGAATCTGCTGTGACAACGAAGTGGGAAACTCCCCTTTCTCAAACTGGATTGCTTTCCAAACGCTGGAATCAGTGCCAACGGCTGCTCCTTTCAACCTGAGTTTCCAGCTGACCGACGAGCAGCTCACCCTGAGCTGGGGGGTGCTGGCCCAGGAGCAGATCAACGGCATGCTGCAGGGCTACAGGGTGCAGTGGGACCTGGGGGGAGAGAGTCAGGAGGCGCTGCAATTCAGGGAGAACACCGTGAACCTGTCCAGAGGGGGGCGCTTCTCCAACGCCACGTTCCGGGTGTCGGCCTGCACTGCCGTGGGCTGCGGGCCCTGGAGCCAGCCTGTCCTGGTACTGCCTGTTGCTGCGAGCCGCTCTCCCGCCCCGCGCGGACATGTCTGGACCGCCCTGCTGGTGGCCGTCCTCACCGCCATCATGCTGGGGCTGCTGCTCACCGTGCTGGTCCGCCGGAGAGGGAAGGAGATGCAGTTCGGGGCCGTCTTTGAGCCCGTGTCTCCGGGGACAGAACCGGCAtgtgtctgtctcccCCTAGTGGAAAGCCTGGGTATCAGTGATGAGCTGAAGGCCAAGCTGCAGGATGTCCTGGTCCCAGAGAGGCTGCTCACTCTAGGACACGTGCTCGGGAAAGGAGAGTTTGGTTCAGTGCGCGAGGCCCACTTAAAAATGGAGGACAGCTCTGTCCAGAAGGTGGCAGTGAAGGTGCTTAAAAGTGACATCAACTCCTCCGGCGATATAGAGCAGTGTCTGCGAGAGGCCGCGTACATGAAGGACTTCCACCACACCAATGTCATCCAGCTGATTGGGGTGAGTCTGCACCGGCGTCCCCAGCAGTGCCTGCCTGTTCCCATGTTGATCCTGCCCTTCATGAAACACGGAGACCTGCACACCTTCCTGCTGATGTCTCGGCTGGGAGACGATCCTTTTaatctctctctgcagatgctCGTCCAGTTCATGCTGGATATCGCCCGTGGGATGGAGTATCTGAGCGGCAAGAACTTCATTCACCGTGACCTGGCTGCACGCAACTGCATCGGGGATTACTACCGCCAGGGCTCGGCCTCCAAGCTGCCAGTGAAGTGGATCGCCCTAGAGAGCCTGGCAGACAATGTCTACACCAGCCAGAGTGACGTGTGGGCGTTCGGGGTGACCATGTGGGAGATTATAACCCGAGGGCAGACCCCCTACCCTGGGGTGGAGAACTCTGAGATCTACGAGTACCTCATCAAGGGGGGCCGTCTGAAACAGCCTCCGGACTGCCTTGATGACATctaTGACATCATGTACAGCTGCTGGAGTCCCAATCCTAAGACCCGGCCTGGGTTCCCCTTCCTAATAGAGCAGCTGGAGGGTTTGTGGGCGGGGCTGTCGCCAGGCCCGGGGAAGGAGGAGCTGCTGTACGTGAATTTGGGAGAGGGTGATGGTCCATTCCAGGAAGAGCCGGGCAGAGCTGTGCCCTGGCAATGTGGAGGCGGGCAGAAGGAGGGCGAGGAGGACTGGCTGATGGTGTCCTCTGGGGCCGCAGGGgccagtggaggagactaccgCTACATAGACCCCCGCCATGCCACTGGAAACTACTGCCAAGCAGGGCCATGCGGGCCCCCCCCGGCTCTTCAACAGGaggaggctgaggaggaggaaaCGGATAGCGTCATCAATGTGTGA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K05116 TYRO3, RSE; TYRO3 protein tyrosine kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000337 True 2466 mRNA 0.60 19 11814939 11829846

Neighbor

gene id symbol gene type direction distance location
AMCG00000338 NA coding downstream 28750 11785077 ~ 11786189 (-)
AMCG00000328 NA coding downstream 33876 11773399 ~ 11781063 (-)
AMCG00000329 NA coding downstream 54702 11734827 ~ 11760237 (-)
AMCG00000331 tbp coding downstream 84062 11726600 ~ 11730877 (-)
AMCG00000330 atg14 coding downstream 88750 11710674 ~ 11726189 (-)
AMCG00000335 lrrc57,LOC106611250 coding upstream 3313 11833159 ~ 11835155 (-)
AMCG00000333 si:dkey-13p1.4,LOC106610752,LOC108436737,LOC103041189,LOC107561535 coding upstream 25070 11854916 ~ 11863616 (-)
AMCG00000354 NA coding upstream 172408 12002254 ~ 12004300 (-)
AMCG00000355 NA coding upstream 175260 12005106 ~ 12019181 (-)
AMCG00000356 NA coding upstream 194748 12024594 ~ 12025496 (-)
G149665 NA non-coding downstream 32304 11781203 ~ 11782635 (-)
G149616 NA non-coding downstream 287847 11526870 ~ 11527092 (-)
G149603 NA non-coding downstream 377120 11437367 ~ 11437819 (-)
G149596 NA non-coding downstream 446708 11338391 ~ 11368231 (-)
G149573 NA non-coding downstream 638873 11175681 ~ 11176066 (-)
G149722 NA non-coding upstream 156001 11985847 ~ 11986112 (-)
G149723 NA non-coding upstream 156346 11986192 ~ 11986519 (-)
G149730 NA non-coding upstream 167992 11997838 ~ 11999294 (-)
G149754 NA non-coding upstream 257750 12087596 ~ 12087970 (-)
G149755 NA non-coding upstream 260161 12090007 ~ 12090266 (-)
AMCG00000334 NA other downstream 6114 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 1755939 10029727 ~ 10059000 (-)
G149441 NA other downstream 1879389 9930970 ~ 9935550 (-)
G149402 NA other downstream 1982806 9831755 ~ 9832133 (-)
G149395 NA other downstream 2048145 9756381 ~ 9766794 (-)
AMCG00000336 NA other upstream 10634 11840480 ~ 11847948 (-)
G149751 NA other upstream 251697 12081543 ~ 12083214 (-)
G149847 NA other upstream 692674 12522520 ~ 12542310 (-)
G150138 NA other upstream 1994108 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 2173230 14003076 ~ 14028927 (-)

Expression


Co-expression Network