AMCG00000341


Basic Information

Item Value
gene id AMCG00000341
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12159466 ~ 12161567 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000341
CTCCCATAGCATGACTGCATGTTTCTGACCTGTTTTAATCCAGTCAGTGGGATCTTTCCATgctgctttttttgttattgaatgATTGCGTGCTACTCCAGACATAGAGCTGAAGGGATGATTGAAAATTTCGAAAGCCACCAGACGCGCTCTAGCGGCGAGCTGTGGTCGGAGATCTGCTCCGCGCTTCCCGACAGCGAGGTCGAAGGTCAGCAAAGGGCAGAGTTCACGGATTCATTCGAGCCCCCTCTGCAAGACAGCACTAATCAAAACGGCACTAATGGGATACCCTCATCTGCGCCCATCAGTCCTTGGGCCCCCATGGAAGACTCTGAGGTGTACATTGCTAGCCTGGAAAATCGCCTGCGCAGAATCAAGGGGCATTCACAGGAAGTGACGTCACGGGACATGCTGCGCACCCTCTCTCAGGCGAAAAAGGAATGCTGGGATAGGTTCCTGCATGATGCTCAGGGGTCGGATCTCTTCCAGGAGGGGAGCGACATTGACCAGAATGCCCTGGAGCAGCTGAAGCGCTGGTTGCAGCCAGAGAAGGTGGCCATCAACGCAGAGGAGCTGCAGTACCTCCTGCACCCCGACACTCACCGCGAAACGCCAGGACCAGAGGGAGCAGAGGGCGGGCAGAGTGGAGCGGATGGAGAGGAgcaggatgaggatgaggagaGCCAGGCGCCTGAGAAATAGACATGTTTCTACAGGACTGCCGTCCCACTGATCGGTGTTACTATGCACGGGCCAAGCATGGCCACCCTAAGCAGCATTCTCTCCACACTTTTTAAACAGGAGGTGATCAGAAAACATTCAGACATAACCATTCagttaccttttattatttttcaggatCAGGTTTATCTGTTATCTGTTAGATCACACATCTATGATTATGAAGTCTGATATATGAACTCCTTTTCAGGAAGTCACTGGTAGTGGCAGGTCTTCTGCTGTAGTGGATTCAATTTCTGTGCCAGTATAACATAGAATAGAACCCCTTCAGAGTCAGTTTATTATAAatggttgtttgttttacccTTTGCAAGAACTATATTTTAGTACTGCATCCATCTGCGTACACTGAGAATGCTTTCTCTACTGCACAGTTAATAGCGAGCAGCACAGTCTCTGATGAAGCCGGTGAGTATAGGAACAGTGCTTCACGGAGAGTGTACTCGCTGTAGGGCACTGAGAGGCTGCCCCATAAAACAGGAATGTCACTGCAGGTGTACTGTACAGTGTACTAGTCTGTCCATGATTTACTGTGGCTTAGACACAGCTGACTCATGACAACCACAGAGCTCTGGATTGTGGCCAAAATCAGTACAATATTTCTTGGGACTTTAATGGCCAGTTTTTCCCTTTATGAAACTTTTAAATCTGACCTTAATAGTGAGTGTATGCTACATATGATTAATTTACACGTTTTATGTCcaaccaaaataatgtataataccTCTAGCCTAGAGAAGATGGaacacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000341 True 1494 mRNA 0.48 4 12159466 12161567

Neighbor

gene id symbol gene type direction distance location
AMCG00000342 NA coding downstream 14816 12143523 ~ 12144650 (-)
AMCG00000356 NA coding downstream 133970 12024594 ~ 12025496 (-)
AMCG00000355 NA coding downstream 140285 12005106 ~ 12019181 (-)
AMCG00000354 NA coding downstream 155166 12002254 ~ 12004300 (-)
AMCG00000333 si:dkey-13p1.4,LOC106610752,LOC108436737,LOC103041189,LOC107561535 coding downstream 295850 11854916 ~ 11863616 (-)
AMCG00000343 NA coding upstream 12068 12173635 ~ 12181462 (-)
AMCG00000348 degs2,LOC107697737,LOC107733197 coding upstream 204898 12366465 ~ 12379163 (-)
AMCG00000360 slc25a29,LOC101165114 coding upstream 243037 12404604 ~ 12414806 (-)
AMCG00000361 wars,LOC107088075,LOC103399041 coding upstream 261436 12423003 ~ 12428292 (-)
AMCG00000362 NA coding upstream 299063 12460630 ~ 12471493 (-)
G149763 NA non-coding downstream 995 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 60975 12090647 ~ 12098491 (-)
G149755 NA non-coding downstream 69200 12090007 ~ 12090266 (-)
G149754 NA non-coding downstream 71496 12087596 ~ 12087970 (-)
G149730 NA non-coding downstream 160172 11997838 ~ 11999294 (-)
G149801 NA non-coding upstream 142433 12304000 ~ 12304343 (-)
G149802 NA non-coding upstream 183842 12345409 ~ 12345710 (-)
G149942 dync1h1,LOC107568493 non-coding upstream 656213 12817780 ~ 12825281 (-)
G149994 NA non-coding upstream 781019 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 785749 12947316 ~ 12949350 (-)
G149751 NA other downstream 76252 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 311518 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 350641 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2100466 10029727 ~ 10059000 (-)
G149441 NA other downstream 2223916 9930970 ~ 9935550 (-)
G149847 NA other upstream 360953 12522520 ~ 12542310 (-)
G150138 NA other upstream 1662387 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1841509 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 2084250 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 2408395 14569962 ~ 14572432 (-)

Expression


Co-expression Network