Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000342 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12143523 ~ 12144650 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0006935 | chemotaxis | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004950 | chemokine receptor activity | molecular_function |
| GO:0004983 | neuropeptide Y receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000342 | True | 1128 | mRNA | 0.55 | 1 | 12143523 | 12144650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000356 | NA | coding | downstream | 118027 | 12024594 ~ 12025496 (-) |
| AMCG00000355 | NA | coding | downstream | 124342 | 12005106 ~ 12019181 (-) |
| AMCG00000354 | NA | coding | downstream | 139223 | 12002254 ~ 12004300 (-) |
| AMCG00000333 | si:dkey-13p1.4,LOC106610752,LOC108436737,LOC103041189,LOC107561535 | coding | downstream | 279907 | 11854916 ~ 11863616 (-) |
| AMCG00000335 | lrrc57,LOC106611250 | coding | downstream | 308368 | 11833159 ~ 11835155 (-) |
| AMCG00000341 | NA | coding | upstream | 14816 | 12159466 ~ 12161567 (-) |
| AMCG00000343 | NA | coding | upstream | 28985 | 12173635 ~ 12181462 (-) |
| AMCG00000348 | degs2,LOC107697737,LOC107733197 | coding | upstream | 221815 | 12366465 ~ 12379163 (-) |
| AMCG00000360 | slc25a29,LOC101165114 | coding | upstream | 259954 | 12404604 ~ 12414806 (-) |
| AMCG00000361 | wars,LOC107088075,LOC103399041 | coding | upstream | 278353 | 12423003 ~ 12428292 (-) |
| G149756 | NA | non-coding | downstream | 45032 | 12090647 ~ 12098491 (-) |
| G149755 | NA | non-coding | downstream | 53257 | 12090007 ~ 12090266 (-) |
| G149754 | NA | non-coding | downstream | 55553 | 12087596 ~ 12087970 (-) |
| G149730 | NA | non-coding | downstream | 144229 | 11997838 ~ 11999294 (-) |
| G149723 | NA | non-coding | downstream | 157004 | 11986192 ~ 11986519 (-) |
| G149763 | NA | non-coding | upstream | 13099 | 12157749 ~ 12158471 (-) |
| G149801 | NA | non-coding | upstream | 159350 | 12304000 ~ 12304343 (-) |
| G149802 | NA | non-coding | upstream | 200759 | 12345409 ~ 12345710 (-) |
| G149942 | dync1h1,LOC107568493 | non-coding | upstream | 673130 | 12817780 ~ 12825281 (-) |
| G149994 | NA | non-coding | upstream | 797936 | 12942586 ~ 12946121 (-) |
| G149751 | NA | other | downstream | 60309 | 12081543 ~ 12083214 (-) |
| AMCG00000336 | NA | other | downstream | 295575 | 11840480 ~ 11847948 (-) |
| AMCG00000334 | NA | other | downstream | 334698 | 11787089 ~ 11808825 (-) |
| AMCG00000300 | NA | other | downstream | 2084523 | 10029727 ~ 10059000 (-) |
| G149441 | NA | other | downstream | 2207973 | 9930970 ~ 9935550 (-) |
| G149847 | NA | other | upstream | 377870 | 12522520 ~ 12542310 (-) |
| G150138 | NA | other | upstream | 1679304 | 13823954 ~ 13826709 (-) |
| AMCG00000409 | exoc5 | other | upstream | 1858426 | 14003076 ~ 14028927 (-) |
| AMCG00000425 | entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 | other | upstream | 2101167 | 14245817 ~ 14261332 (-) |
| AMCG00000436 | NA | other | upstream | 2425312 | 14569962 ~ 14572432 (-) |
