AMCG00000354


Basic Information

Item Value
gene id AMCG00000354
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12002254 ~ 12004300 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000354
ATGGCCGCCTTTCAGCTAACAATGGCAGTCTGCTCTGCCGCCCAATGCAGGACGTACCTGGAAGAGGAGCTGGTGCGCGCCCGGGAGCGGCCCAAACTGCGCAAGGACATGTACAAGAAGATGACGGAGGTGGACAAGGCCGCCCCCACCCCAGAGGAGCACGAACAGCAGGCCGTCACCAAGCCGCGCTACATGCAGTGGAGGGAAACCCTgagctccacacacacactgggcttCCGCATCGAGGGCATCAAAACAGCAGATGGGGCTTGTAACACAGACTTCAAGAAGACTAGGTTAAAGGAAGATGTGACCAAAGTCTTCACTGATTTTGTGGAAGGAAACCAAAACATCATTAAAAGCTACCTGTCTAAACTGGAAGAGATCAAGGGGGTCCTGGAGTCATCTGAATTCTTCAAAAGACACGAGGTGATCGGGAGCTCCCTGCTCTTCGTCCACGACCGGAATGAAAAGGCCAACGTGTGGCTCATCGATTTCGGGAAGACCACGGCCCTCCCCGAGGGGCAGATGCTGGACCACCGGATGCCCTGGCAGGAGGGCAACCGCGAGGACGGCTATCTGTGGGGGCTTGACAatgtgctgcagctgctgcgtGGCATGCTGCAGGACTAA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000354 True 633 mRNA 0.57 5 12002254 12004300

Neighbor

gene id symbol gene type direction distance location
AMCG00000333 si:dkey-13p1.4,LOC106610752,LOC108436737,LOC103041189,LOC107561535 coding downstream 138638 11854916 ~ 11863616 (-)
AMCG00000335 lrrc57,LOC106611250 coding downstream 167099 11833159 ~ 11835155 (-)
AMCG00000337 NA coding downstream 172408 11814939 ~ 11829846 (-)
AMCG00000338 NA coding downstream 216065 11785077 ~ 11786189 (-)
AMCG00000328 NA coding downstream 221191 11773399 ~ 11781063 (-)
AMCG00000355 NA coding upstream 806 12005106 ~ 12019181 (-)
AMCG00000356 NA coding upstream 20294 12024594 ~ 12025496 (-)
AMCG00000342 NA coding upstream 139223 12143523 ~ 12144650 (-)
AMCG00000341 NA coding upstream 155166 12159466 ~ 12161567 (-)
AMCG00000343 NA coding upstream 169335 12173635 ~ 12181462 (-)
G149730 NA non-coding downstream 2960 11997838 ~ 11999294 (-)
G149723 NA non-coding downstream 15735 11986192 ~ 11986519 (-)
G149722 NA non-coding downstream 16142 11985847 ~ 11986112 (-)
G149665 NA non-coding downstream 219619 11781203 ~ 11782635 (-)
G149616 NA non-coding downstream 475162 11526870 ~ 11527092 (-)
G149754 NA non-coding upstream 83296 12087596 ~ 12087970 (-)
G149755 NA non-coding upstream 85707 12090007 ~ 12090266 (-)
G149756 NA non-coding upstream 86347 12090647 ~ 12098491 (-)
G149763 NA non-coding upstream 153449 12157749 ~ 12158471 (-)
G149801 NA non-coding upstream 299700 12304000 ~ 12304343 (-)
AMCG00000336 NA other downstream 154306 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 193429 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 1943254 10029727 ~ 10059000 (-)
G149441 NA other downstream 2066704 9930970 ~ 9935550 (-)
G149402 NA other downstream 2170121 9831755 ~ 9832133 (-)
G149751 NA other upstream 77243 12081543 ~ 12083214 (-)
G149847 NA other upstream 518220 12522520 ~ 12542310 (-)
G150138 NA other upstream 1819654 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1998776 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 2241517 14245817 ~ 14261332 (-)

Expression


Co-expression Network