AMCG00000360 (slc25a29,LOC101165114)


Basic Information

Item Value
gene id AMCG00000360
gene name slc25a29,LOC101165114
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12404604 ~ 12414806 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000360
CCCCTGCCTCACGGTACAGAAATAGAAAGAGCTAGAAGGTTGCCGGTGCTTCATTTTTACCCGACTCTCAAGAGGGAAATCGGACAAAATATACAACACAAAACCATCTAGACAGAGACGTTTGCTGCCTCTTTTGAGACAGACTGTACATTAAATCCCAATTGCCTGGAAATCCCACCGCCAAGTGCATGAATTGTGACGCAGAAAGAATTAAGTTGTAAAGCACACTGGGAAGAAAGCATCACGCGTTGCAGCAGCCTgtgcacagagacagaaaagggCTGCTTTGTTGAGGACTGCGAGACGAGAAGACCCTGAGGTTGTAGAAGGGAATGGCATTGGACTTTGTGGCAGGATGTCTGGGAGGTGCTGCTGGTGTCTTAGTAGGACACCCTTTTGACACTGTCAAGgtcAGACTCCAAGTTCAAAATGTTGACAGGCCTCTGTATCGGGGGACTTTTCACTGCTTCCAGTCAATTGCAAGGCAAGAGTCTATGTTCGGACTCTACAAAGGCATTGGCTCCCCCATGATGGGCTTGACCTTCATCAATGCCATAGTATTTGGCGTGCAGGGGAATGCCATGCGGCTGTTGGGCCGGGACACCCCGATGAACCAGTTTCTGGCAGGTTCGGCCGCAGGGGCCATCCAGTGTGTCATCTGCTGCCCCATGGAACTGGCCAAGACGCGCATGCAGCTGCAGGGGACGGGAGAGAAGAAGTCAAAGCGGCGTCTGTACAAGAACTCCCTGGACTGCCTGGTGAGGATCTACAACAAGGAGGGGCTGCGAGGCATCAACCGGGGCATGCTGACCACCTTCGTCCGTGAAACCCCTGCTTTCGGCTTCTACTTCTTGACCTATGACTGCTTGACGCGCTATCTGGGCTGCGAGCCTGAAGACCCCTACATGATCCCCAAGCTGCTGTTCGCCGGTGGGATGTCGGGCATCGCCTCCTGGCTGTCTACTTACCCTGCCGACGTCATCAAGTCCCGCTTGCAGGCTGATGGGGTCGGAGGGGTCAACCAGTACAGTGGCATCCTAGACTGTGTACGGCAGAGCTGGAAGAAGGAGGGCTGGAGGGTGTTCACGCGGGGGCTCACCTCCACCCTGCTCCGTGCCTTCCCCGTCAATGCAGCCACGTTTGCTACCGTGACTCTGTTCCTGATCTACATGAGGGGCGAGGACGAGGGGCTGAAGGACTGTGAGCCGGTCCCTGCCCCACCTCCTGCCCCCGCCTCTGCACTGCAGCAGCAGCCATCGAGCTTGTGATCGTCGACGTTGGCTGCTCTGTTGTGCCCACTGAGGTGGACCCCTCCCATGAGCCCTTGCAGGCTGGCTGACTGAGAGAGCGCACATTCAATGGTTGGCTTTGCAGTGGAGTCTATTTTTATAAAGTGTAAATTTAGAGTTAAGCTATAAGGATGtaaatataatctttttttttttttttttttttt

Function

symbol description
slc25a29 Predicted to enable acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport and amino acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC25A29 (solute carrier family 25 member 29).

NR:

description
PREDICTED: mitochondrial basic amino acids transporter isoform X1

GO: NA

KEGG:

id description
K15109 SLC25A20_29, CACT, CACL, CRC1; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000360 True 1456 mRNA 0.54 4 12404604 12414806

Neighbor

gene id symbol gene type direction distance location
AMCG00000348 degs2,LOC107697737,LOC107733197 coding downstream 25441 12366465 ~ 12379163 (-)
AMCG00000343 NA coding downstream 223142 12173635 ~ 12181462 (-)
AMCG00000341 NA coding downstream 243037 12159466 ~ 12161567 (-)
AMCG00000342 NA coding downstream 259954 12143523 ~ 12144650 (-)
AMCG00000356 NA coding downstream 379108 12024594 ~ 12025496 (-)
AMCG00000361 wars,LOC107088075,LOC103399041 coding upstream 8197 12423003 ~ 12428292 (-)
AMCG00000362 NA coding upstream 45824 12460630 ~ 12471493 (-)
AMCG00000364 NA coding upstream 74377 12489183 ~ 12517199 (-)
AMCG00000363 NA coding upstream 134424 12549230 ~ 12554739 (-)
AMCG00000378 NA coding upstream 411787 12826593 ~ 12830150 (-)
G149802 NA non-coding downstream 58894 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 100261 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 246133 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 306113 12090647 ~ 12098491 (-)
G149755 NA non-coding downstream 314338 12090007 ~ 12090266 (-)
G149942 dync1h1,LOC107568493 non-coding upstream 402974 12817780 ~ 12825281 (-)
G149994 NA non-coding upstream 527780 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 532510 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 535119 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 552154 12966960 ~ 12968715 (-)
G149751 NA other downstream 321390 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 556656 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 595779 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2345604 10029727 ~ 10059000 (-)
G149441 NA other downstream 2469054 9930970 ~ 9935550 (-)
G149847 NA other upstream 107714 12522520 ~ 12542310 (-)
G150138 NA other upstream 1409148 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1588270 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1831011 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 2155156 14569962 ~ 14572432 (-)

Expression


Co-expression Network