AMCG00000362


Basic Information

Item Value
gene id AMCG00000362
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12460630 ~ 12471493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000362
GTCTCAGCACCACGACGAGGAGAAGAGAGCCCTGAGCCACGAGATCATCGTTCTCAACAATCACCTAATGGAGGCCAAGATAACCATTGATAAGCTTCGGGAGGATAATGACCTCTACCGCAAGGATTGCAATTTGGCTGCTCAACTGCTCCAGTGCAGCAAGTCCCACTACCGGGCCCACAAGCTCTCCGAGCTGCCCACTGAGTTTCAGGAGCGGGTCAGCATGCACATGGAGAAGCACGGCTGCGGGGTGTCCCTGCCCCTGTGCCACTCCCCGTACTCGGACTCTGTCCCCACCGCCGTCATTGCCAAACTGCTAGAGAAGCCGGAGCCCAACAGCATGCCCTGCTCCCGAGCCTCGAGCCCGCAGTCCCGCGAGGTCAACTTCATGCACAACAACATGGGCAGCACAGAGAAGCTGAACCGCAGGCCGGCCTACAAGGCGGACCTGTACTGCAGCGACACGGCGCTCTACTGCCCGGATGAGCGGCGCCGGGAGAGGCGGCAGAGCGTGGACCTGCACATGCGGGAGCCCACGGTGTTCCGGCAGCAGAACTCCACGGACAGCAACACGGAGGAGGACGGCTTCCACTCCAGCTTCTCCCACGAGCCGTTCACCGAGTTCGTCACCTCCCTGCCCGCCTCCAGCTCCTACTCCAGCTTCAGCGTGGCCTCGGACGAGAAAGGAAACGCCCCCAGCAGCACCCTCTCCTCCTCGCACCAGGCCATCTACATGGACTGGAGGGACGAGAACTACGACCGGAAGAGCAACTCTTCCTACGAGAAGGACAGCCCCGGCTTCCCCAAGTCCCACAGTTTCCAGCACGTGGCGCACGGCAGCCAGAACGGCACGTCACCCGTCTACACCAGGACGATCCCTACGTGCTTCAGCGAGCCCTACCACTCGCCACGGCTGACGTCCGCGCACAGCATGGGCTCCACCAAGCTGTACGGGGATAGCCGGGGCAACGTCCACATCCCGGAGGAGGAACTAACTGGCCGCTGGAGGCAGCTTAGCGTGGAGGACATCAATGCCTACTCCTACAGGAACCCAGGCAGGGTCTCACCCTACAGTTTTTCCGAGCAGCACTTTACAATCGGCCCTTCAAAGACCAAGCTGGGCCCCCTATACAGCAGCTTCCAAGAAGGAGACGACGTGTACCACAGCAGGATTCTGGACCCTTGTTTCATGACCACGAGCCCCAGCCCAGAGCACGACATCGGACACCGCAAACAAGAGAAGGTGCAAATGTATCGGACGAAGGAGGACAGCCAGGAGTCGGACCGGAGCCTGTTTCACTCGGGCAGCTCTAAGGACAAAGAGAGCACCGCGGGCAGCATGAAGAAGGAGTATGTCGACGTCAGCCCCAACAGCTCGGCAGAGTCTTTAAACCAAAGTTCACTGGAGCATTCGGAAATGCAGCACTATCAAATAGACCACGACAGCCTGTCTGTGCTGAGCAAGAATCCGCCTCAGTACCAAAAATTTGGGACCACGGGACTTTGCAGGAAAGACAGTCTTACAAAGGCACAGTTGTATGGGACACTGCTGAATTGAAAAGCtttgatgtttatttgtatgagggggaaaacaaaaaataagtcaGTTATTTAGTTCCTAATGATGAGGCTTATTTTGGCCCAGGTGGGTCGTCCCAATGGGTCCGAACTTTAGCACAGAATGCTTGCAGAGGAGGTGTCAGGCTACAGCAGGGTTTCAGATTCTTGCTGATGAAAGCGTGGCTGATATGGCTGTCAGCGAGCTCCCAGTGACAGGAGCCGGGGCGTCTGGCAGCTTTTCACTGTTATTCTTCACTCTTTAAGTTCTTCAGAGATAGTTTAACAGTTGCTATACTCTAAGACACTAGTTTTCATAGAGTTAAAGGACaatgtgtgcgtgtgggtgGGAGTGTCTTACAGATGCAGAAAATCTGCAGCAGAATTTGAAGGTTTCTTTTCCACATTGGTcagtttaaagtttattttgctCATTTATTTAAGGGAGTATATTGAGAAGATAAGGTGTTGGACACTTTGAAAGCAATAACATAGATGATAAAACAACTGGTTATGGCAAGAGCATTGACAAAGGGTACCATTATTATAATACAGTTTGTGTAGGCACAAATTAAGACAGCATTGGAAATGACtgttaaatcaatataaatatgtatattggtGATGTGATAACAATTCCGATTTCATTCTACAAACACAATAGAAAACAATTTCAAAGTGAGAATTTGCAGTTGGTAAATATATCTTCCTTCCAGGAGTTTGATTTctgttacaatgttttattttttcacgtCTAGGAATACACTGCCCCTCTAACTTTGGAAACGGTAGCTGAACTGCTGAATCGCAGGAAATTCCCTCATCAATCATTCAGATAAGATGGATTACAAAATATCGAATCATAACAGTATTTAACCAAATTGTTTAATTCATGAATTCGTTTGGTAGCTTTTGCAttgatggaaaaaacaaaactatttattttctcattcatATTTTGGAAAGAAATCATGAATTGGCTGCACCACAAACCCCAGAACATTTTGCCTTAAATTTGATTAGCTTCTGCTGCCAGTTCTGCTCCTTTTTCCAAATTTCCAGACAGGTAGTGTAAATATCTGTATAGTGCTGGGTTTACACCGAGTTTAGGCTGGCCAGGGTAATCCTCTCTTTCTGTGTTGTACATTTCTGAGGATATCTGCATGGGCCTTGTAGTCCTAACACAGGTACCCTGCTATGGCATTTAATTTCACTGTGGTGTACTCTGCAATGCCTTTCCATATTATCCTAAATTGCTTTAAAGGTTCACTGACCGAGTCACTTGTTATGCCCTCTTTCTCGAGCTGCTTACTTGAGGCTCTCTGCACAATTCCACAACTATGTGCACAGGCAACACTAGAGCTCCTCTACaagatgtgtatttttgtgcCGACGCCTGTTGGAAGAGCACAGGAATTACAGATGTGGCAGAAGCAGGCTTAGTGTGCAGGAGAGTCGCAGATCACGTGAAAGACCGAGAGGTTGAGAGAGGAGGATTCTCACAAACACGGACACCCTTATTTTCTGTTGTATATattgattcattatttaattgaggattggtatttttttccctgctaTGTTGATGTTCTTTACTTTAATCCTTCCAGATGTTTTCCTGTCCTGTTCTACCTCAGATTTGATTAACGTTTTACCATGGAATAATACTTCAGCtgtttatatttacattctACTGCATGTTTCcatatttttgttgtatgtttctTTACATAATAAAGAACAATGACGCACTTACACCACAGCCTACTGAGGTAGGAGCCGTCTTGATTTTTCTAATGCTGGGATCACAAGGATGACATCTTTTCAGGGGCTGCAGGAGCAAACACAGTGAATCTTTATGGATGATCAGTTTTGCACACAATCTATGTGGATGCCAAGTTTATAGCTTACATCCCACCTGGCTTTATAGATCTGTTTAAATGATAATCTGCTATAAACATAGGAAAAGGGCTAATTTGGTTATTTAAAGCGGCAAACTATTGCAGAATCCTTAAAAGAGCTcatgtgaaatgaaaactaaagaCCCTTAGGCGCTGGACCTGAAAGAACAGGTCAAGGTTcgtattaaaaattaaaaagtactgTAAACAAGTGCACACATTGTCTGAAAATCTTTCATCAAGTTatttacaatcaaataaatgttattcGTATCTTTGAGAAGAAATCAGATTGCAAACATAGTTACATGCTACTGTAGTACGGCAGCTAACAAAAccttattgtattattttcaaacgAGAAAATATGATTATgcagaattaaaacaacattaaatagCAGTACACGTTGAAATTTGAATCCCTGGGTTTTTGGAAGGGCAGTCTGCacacagtgaaaaaaacaaggCTTTGGAAAAAAATTGCATAAAAACATCTTTTGAAGAGGAACTCTGCTTCAGTACAATGCGTCATCCTACAACGCTTTTGTGCTACATTTCATTGAAAGAGTGCTCTATAATTCAATATCAATCCAGCTGCCAAACAGGCATCACTTCAGATTGTGGGCGTTGGCAAAAAATACTTCCACATCAACTAAAGAGACCTATTGTACACATCCTTCCCTAGCAGATTAAGATTAATTTTCCTAACCTAATCATCTTCTACAAACTTTTTTCAGAGGACATGAGGTACTAGACAACTTATTGGCTTGCCGTTTACCTTCActgcttttattaaatgtatgctttgttttatttaaggacAAAAAACAGATGCCATTTGATTTTTTCTCCAATTAGGTCAGTTTCCGAATGTGGTAGATATGGGTGCATGCTCATTAATTCTTACAATGAATTTACAGAGTACAGTTTActctttgaaatgttaattaacaaAGCTGGCTTTGATCCACTCCACTAGGCCTGTAACGTGCCACAActatttctgtaaaacaaaatttgAAGAggttttaaaccaaaaaaaaaagacttcctTTAGAACATGACAACGTTTATGATGTAATTTTGAACATCTTGTGTTTCATGTCATTTGACAtcacaatgctttttttttttttttttttacctattaTATCTACAGGTcgaaaaatatttttgtatccaCTATCAAAGACTAAACATACAAGTAATAGGGACTATTTCTGTCCTCCTTTACCAAGTGAAATCATTGCATCATAGTTTATTTGGCTTTAACTTTTGCTCTGTGAATGTGACTAATGAGCAGTATATAGCTAGACGTATATGGTTAGCATATTGTTCCAGATACTAGTGCCATACTGTGGCTTCACTGCAGTGTGTGAACGGTTCAACCGGAGCCTTAACACGAAGCGGTTTGGGAGAGCAAATCACAGTAGCAGTCatagaaaatgtaatctaaCAATAAGGCATATAGATCACTGCGTTGACCttcagaaatatgaataattccGGCCACCAACTGAAACTGGCCATTAGTAACTGAGAACTCCTTATTCAAcgtaaaaagtgaaaaacaaaaaggagataATGTGCGTGTTTCAGAATGAAGTCCACGGGGGAAGGCAGAGAGACAGCACGACACAGAGATGAAGATGTAGCTAAAGAGATGATTTCCAGGAAAGAAATCCACAATCCATAAGTTCTCCTCCAGCGAAGCAGAAGGAAAAGTTGACAGCTTTTCCAAACCCACAATCAGctctaaatcaaaataaagactTTCTTTGCTCAATGTTTACCATCACAGGTGTCATCAGTTTACAATCACAGCTGCACCAGCACACCTGGGAATGTAAACTTTTAACAGTAAAAGTTAGCTGACTGTAGTGCGGGACCGATGTCTGCTTTGCTGGAGGAGAACGTGGTGACTGAGGATGgatatgtgtatgtatgaagCAGCAGCATTTCATCCCACTAAGCCTCggtgaacatttt

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04911 Insulin secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000362 True 5449 mRNA 0.44 3 12460630 12471493

Neighbor

gene id symbol gene type direction distance location
AMCG00000361 wars,LOC107088075,LOC103399041 coding downstream 32338 12423003 ~ 12428292 (-)
AMCG00000360 slc25a29,LOC101165114 coding downstream 45824 12404604 ~ 12414806 (-)
AMCG00000348 degs2,LOC107697737,LOC107733197 coding downstream 81467 12366465 ~ 12379163 (-)
AMCG00000343 NA coding downstream 279168 12173635 ~ 12181462 (-)
AMCG00000341 NA coding downstream 299063 12159466 ~ 12161567 (-)
AMCG00000364 NA coding upstream 17690 12489183 ~ 12517199 (-)
AMCG00000363 NA coding upstream 77737 12549230 ~ 12554739 (-)
AMCG00000378 NA coding upstream 355100 12826593 ~ 12830150 (-)
AMCG00000379 LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 coding upstream 361707 12833200 ~ 12847221 (-)
AMCG00000374 NA coding upstream 414251 12885744 ~ 12896450 (-)
G149802 NA non-coding downstream 114920 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 156287 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 302159 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 362139 12090647 ~ 12098491 (-)
G149755 NA non-coding downstream 370364 12090007 ~ 12090266 (-)
G149942 dync1h1,LOC107568493 non-coding upstream 346287 12817780 ~ 12825281 (-)
G149994 NA non-coding upstream 471093 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 475823 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 478432 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 495467 12966960 ~ 12968715 (-)
G149751 NA other downstream 377416 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 612682 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 651805 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2401630 10029727 ~ 10059000 (-)
G149441 NA other downstream 2525080 9930970 ~ 9935550 (-)
G149847 NA other upstream 51027 12522520 ~ 12542310 (-)
G150138 NA other upstream 1352461 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1531583 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1774324 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 2098469 14569962 ~ 14572432 (-)

Expression


Co-expression Network