AMCG00000363


Basic Information

Item Value
gene id AMCG00000363
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12549230 ~ 12554739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000363
ATGGCGATTGCTTTGATCCAGTCGCTAAGGTTGCTGGGAATTTTGCTTTGTAGCGCTACGTCACGGATACTATGAATCGCACAGCGGCACAGTGGCATGGCGACTGTCACcagaaagcaaataaattaGGCCTACTGTAAACGGAGCCTAGGATTTAGCCTACAAGTAAGGTCATTTCTCAGTTTCTTAGGGCACGGATTTTAACAGCCTGACATGGATGAAAGTGGAAACAGTAGGTCGGCATTGGGAAGCAGAGTAAGAAAGGATATCAAGTTCTATGATTTCATTAAGCATGTTTCTCAGAAAGACTTCATTCGTCATGTTATCATGGTGACAATTCTACTGAACGCCCTGTTCATGGCATTGGAGGCAGACTATGATCTGAATTTCAAAAACTATGTCCTTTTTCAGGTCATAGATGAGTTCTTTCTGGCCATTTACACAATGGAGTTCCTGATAAAGGTTTATGTGGAGCCGAAGGGATACTGGAAAAGTAGCTACAACATTTTTGACACCTTTATTCTGATTTTGTCCTACATCCCTCTGATCatgagtgggagtgggagtgggagtggggtgCGCGCTATCAGATCACTGACCATGCTCCGCACCATTCGCTTATTAAGAGTGTTGAGGACGATCTCCTACATCCGGGCATTTCAGGTCCTGATCTTAGCGTTGTTCAAGGCCCTGACGCACGCGGTCTATTCCGCAATCCTGCTCTTCATCCTCGTGTTGCTTTTTGCCATAATCGGACATGACTTCTTCGGAGATACTCCCACTGGTGACCCACAGACCTGGGGTGACCTGGGCAATGCACTTTGTGTTGTCTTCAGTCTTGTAACTGTTGATGGCTGGACAGATGTACAGGGCCGGTTGGATGACTTGGGCTTCACTTTCAGTTGGTTGTATACCATTGCCTTTATTCTACTGGGATATGTAATATTCTATAGTATGTTCGTTGGAGCAGCCATGATAGCATTTCAgGATGCAACCAAAATCTTTGAAGAGGACATGCAGAATGAACGAGAAGCCTCCTTGGCAAAAAAGAAGGAGACACTCTTAAAAAGGCAACAAGAGGAACTTGGAGAGTTTATTCAAAGCCAAGAGACCCATGATCGCCAAGATTTCAATGAACGGGTGGAGAAGTTCAGAATATCTTTGACAGACAGTGATGACATTGTAATGGAAGATGTCTATTCAAACTTGACATTCATAAATACCTACTTAACATCTTTAGATAACCAGGATGAATCAATAAATAGaatgTCAGACTTTTATGACGAAACAATCAGGTCATTAAGTGAGATTTTGGAACGAAGGGACTTGGTTGAAGCAGAGGCAGAATAGAAATTGAAGGTCCCAGTGAATAAACTAAGTTCtggaaatctttaaaaaaagtaatggtTCTTCTGACAGAATCAAATACAAGATGTACTGGCAACCTTACAATGAGTCTTTGTTTATCGGCATGGTTTTACCTTAGATTGTGGCATAGCAAGAAACATACGCAGGGGGTGGGGGCAACAGGGATTAGTTTCAGGTTGTATGTCATGCAACCAccaattaaaatagttttaatggaCTTGCAAAATTGAGTCCATTGTAATGTATtgcataacaaaatgtaatctggtATGGCAGGTATTACACTGGTGAACTGAAGAGTCTTTTAGATTAGATTTCTAATGAAGCAGGCAGTGCacttttatttaagttatttaagcTTCC

Function

GO: NA

KEGG:

id description
K16891 CATSPER3; cation channel sperm-associated protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000363 True 1731 mRNA 0.42 8 12549230 12554739

Neighbor

gene id symbol gene type direction distance location
AMCG00000364 NA coding downstream 32031 12489183 ~ 12517199 (-)
AMCG00000362 NA coding downstream 77737 12460630 ~ 12471493 (-)
AMCG00000361 wars,LOC107088075,LOC103399041 coding downstream 120938 12423003 ~ 12428292 (-)
AMCG00000360 slc25a29,LOC101165114 coding downstream 134424 12404604 ~ 12414806 (-)
AMCG00000348 degs2,LOC107697737,LOC107733197 coding downstream 170067 12366465 ~ 12379163 (-)
AMCG00000378 NA coding upstream 271854 12826593 ~ 12830150 (-)
AMCG00000379 LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 coding upstream 278461 12833200 ~ 12847221 (-)
AMCG00000374 NA coding upstream 331005 12885744 ~ 12896450 (-)
AMCG00000373 NA coding upstream 357433 12912172 ~ 12919957 (-)
AMCG00000372 pole2 coding upstream 366644 12921383 ~ 12932189 (-)
G149802 NA non-coding downstream 203520 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 244887 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 390759 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 450739 12090647 ~ 12098491 (-)
G149755 NA non-coding downstream 458964 12090007 ~ 12090266 (-)
G149942 dync1h1,LOC107568493 non-coding upstream 263041 12817780 ~ 12825281 (-)
G149994 NA non-coding upstream 387847 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 392577 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 395186 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 412221 12966960 ~ 12968715 (-)
G149847 NA other downstream 6920 12522520 ~ 12542310 (-)
G149751 NA other downstream 466016 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 701282 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 740405 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2490230 10029727 ~ 10059000 (-)
G150138 NA other upstream 1269215 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1448337 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1691078 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 2015223 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 2569286 15124025 ~ 15137923 (-)

Expression


Co-expression Network