AMCG00000373


Basic Information

Item Value
gene id AMCG00000373
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12912172 ~ 12919957 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000373
ATGGAGGACGGGAACCAGGATGAAAATCCGATGCTggcagtggaggaggagggggaggaggaggaggaagaggaggagtaCTATGGCAGGGATGAAGACGATGAGGCTTTCGACAGCACGGATGATGAGGAGCTGCTAGACCATGAGCTGGCCTCACCCGCTAATAACGTCTTGGAGATGGACATGCCAGCCAGGCGCAGCGGCCACGTTGCAGTAGCCTGTGGCAactatatgtatgtgtggggCGGATATAAGAATACCGAGTCCACTGGATTTATCGATTGCTACCTGCCAAGAAATGAAATTTGGATTTTTAATATGGAGACCAGAAGatgGAAGAAGAGGTTGACTGTGGGAGACGTGCCCCCCTCAATGTCAGGCAGCTGTGCCGTGTGTGTGGACGGCGTTTTCTATCTCTTTGGAGGTCATCACGCCCGAGGGAATACCAACAAGTTCTACAGACTCCCGCTGAGCTCAGAAACACTGCACTGGGAGAAGATGCGGGATCTCAAAGGACTGGCTCCAACCTGCAAGGACAAGCTGGGCTGCTGGGTGAACAAGAACAGACTGGTGTACTTCGGCGGGTATGGCTACGTCGCGAATGGTGGTCACCTGGGAACGTTTGAATATGACGAGACGTCGTTCTTGGCTAACGGTGCCGACCGCGGCTGGAACAATCACATTCACATCCTGGACCTCGAGACGCTGACATGGAGCCAGCCAGTGACCACGGGCAACCCCCCCTCTCCACGAGCTGCCCATACTTGTGCCACCATAGGCAACCGGGGCTACGTGTTCGGAGGCAGATACAGGGAGTCCCGCCTCAATGACCTGTACTTCATTAACATGGACACCTGGGAGTGGAGTGAAATTGGGGTGATGGGCTGTACGCGGTATGTCTCTGACCGTGGGTGCTCTGTCCCTCAGGAGTGTCCCACAGCAGGGTCCAGTTGGCCGTTCCTGGCACTCCTTCATCCCGGTGATGCCTGGCTTTACTGTGTGAGCAAAAATGAGTGGAAACCTTTCAAGCACAGCAACACGGAGAGCCCCAGGCTGTGGCACACCGCCTGCGCCAGCGAGGAAGGAGAGGTGTTCGTGTTCGGCGGCTGCGCTAACAACCTGCTCTCTCAGCAGCGAGCTGCCCACAAGAATGAAATACTGGTCTTTACTGTTCAGCCCAAGACTCTTGTGAGGTCTTGCATGGAGACCGTGCTGCAGTTTAAAGACCTCCTGGCGGGAGCCTGGGAGTGCCTCCCCAAACACTTGCTTTGCAACCTCACTCAGAGACTGGGCAGCAACAATACGCTGGGCTCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000373 True 1317 mRNA 0.56 13 12912172 12919957

Neighbor

gene id symbol gene type direction distance location
AMCG00000374 NA coding downstream 15722 12885744 ~ 12896450 (-)
AMCG00000379 LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 coding downstream 64951 12833200 ~ 12847221 (-)
AMCG00000378 NA coding downstream 82022 12826593 ~ 12830150 (-)
AMCG00000363 NA coding downstream 357433 12549230 ~ 12554739 (-)
AMCG00000364 NA coding downstream 394973 12489183 ~ 12517199 (-)
AMCG00000372 pole2 coding upstream 1426 12921383 ~ 12932189 (-)
AMCG00000375 NA coding upstream 30918 12950875 ~ 12952176 (-)
AMCG00000371 NA coding upstream 35029 12954986 ~ 12964206 (-)
AMCG00000382 NA coding upstream 217829 13137786 ~ 13146523 (-)
AMCG00000383 NA coding upstream 226573 13146530 ~ 13226435 (-)
G149942 dync1h1,LOC107568493 non-coding downstream 86891 12817780 ~ 12825281 (-)
G149802 NA non-coding downstream 566462 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 607829 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 753701 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 813681 12090647 ~ 12098491 (-)
G149994 NA non-coding upstream 22629 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 27359 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 29968 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 47003 12966960 ~ 12968715 (-)
G150072 NA non-coding upstream 679877 13599834 ~ 13682131 (-)
G149847 NA other downstream 369862 12522520 ~ 12542310 (-)
G149751 NA other downstream 828958 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 1064224 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1103347 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2853172 10029727 ~ 10059000 (-)
G150138 NA other upstream 903997 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1083119 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1325860 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 1650005 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 2204068 15124025 ~ 15137923 (-)

Expression


Co-expression Network