AMCG00000374


Basic Information

Item Value
gene id AMCG00000374
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12885744 ~ 12896450 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000374
ATGGCAAACGTGGTGGACCTGCTGAAATATGGACATTTGCCCGACAAGCGCCGGTACACCTCGAACAGGCCAACGGGCTCTAACCTGAGCGCAACTCTCAGAAACAGAGACTACAGGATAATACACAAATTAGGTGAAGGGACGTTTTCTGAGGTGGTTAAAACCCAAAGTCTTAAGGATGGCAGTTACTATGCCTGCAAGACCATGAAACAGCCCCTAGAAAGCCTGGAGCAGGCGAACAACCTGCGTGAAGTCCAGGCGATGAAGCGGCTGAGCCCACACCCAAACATCCTGCAGCTGCATGAGCTCATTTTTGATAAAAAGACGGGCTCCCTTTCCCTAATATGTGAACTTATGGACATGAACATCTATGAGTTAATACGAGGAAGGCGCCATCCACTGCCAGAGAGTAAAGTAAGGAGCTACATGTACCAGCTGTGCAAGTCCTTGGATCACATGCACAGAAATGGGATCTTTCATCGAGATGTTAAGCCTGAAAACATCTTAATCAGGCAGAAAGACACGCTGAAGCTGGCGGACTTTGGCTCGTGCCGGAGCGTGTACTCCAAGCCGCCCTACACAGAGTACATCTCTACGCGCTGGTACCGAGCTCCCGAGTGCCTTCTCACCGACGGCTACTACTCCTACAAGATGGATGTGTGGAGTGTCGGCTGCGTCTTCTTTGAAATCATCAGCTTCAGCCCTCTTTTCCCGGGCTGCAATGAGTTAGATCAGGTTTCCAAAATCCACGATGTCTTGGGCTCACCTGACAATGATCTTCTTCGGAAGTTCAAAAAGTCCAGAGCGATGCACTTTGACTTTCCTCCCAAGAAAGGCTGTGGGATCTCTCAGCTGATCCCACAGTGCTCTCCCAGTGGCCTGTCCCTGATGTACGAGATGCTGGAGTACGACCCTGATGAGAGGATCAGCTCAAAGGCCGCCCTGCAGCACCCTTACTTCAAGGAGCTCCGAGTGGCTGAGAAGCAAGCTGCCACCCTGCGCAGAGCCATCGGgacagtggagggagcagaggaCAGCGGGACGCCCAACTCTGTCGACAACCTGTGGCGCATCGCAAGGCAAGGGAGGAGACAGcaacatGTTAAGCATCTTGCAGATCCCAGCATAAGACGGAATGGGCCACCTTATCCAGTTGAATTACCAAAGCTGAATGTGGTTGTACCTGTGCCTAAAATAGCCTCGTACCCCATCACCTCTCTGCCTTCAATCATCGCACACAATACATCGCTTCCAGCATTGAAGGCAAACAAATACCAGGGGAAAATAACAAAGCAGCCCAGCAATGAGCCACATCATCAGCCTTTCAAGAGCTACCACATCCCGCCCCTGGACAGGAAAGGCAGGGGCTACTGAAGATGATCACCGGGCCAAAGGGCTCCTCTTCTCGCTGCCCTGGAGGAACAGCTGCTGACTCAAGCTCTTCTCCAGTCCTCCACACGAGAACACAATAAACCCGACTTTAATTACTCCAGTTCACAATAATAAGAAGAGGTTCAGTAACACAGAATATAGCTAAACGACTGAAACTGTTAAaatcatgttaattaaaaataatatatatattccaagtAGAATTATTGCCCCAGCCCCCCCTCCATTCAAGACTCAATCATAAACATGAAATGGTGCTGATGAACACACAGACCAGGTTACAGCATGTGATGCTTTCATCCTTGTGGTAAATGCAGAATACAATAAGGGTACATACCCCATACCCAtctttaacaatacaaaaaaacagtacGTATTGTGACCTTTATGAACACTGGCAGCACATTTTCCAGTGGCTAGACTTTCGTATTTCATCGTACACTATACTTGCTTTGGTTATCCCCCAGATCGTTTAATACTCATTATAACGCCCTGGAAAGTGTTGCAGGAGGATGCAGTGCCACATGAATTTCTCTTGACCTCTGTAATAAGGAGCTCTGCAAAATTATATACATGCAAAATAACTTTGGTTTGAATAGTTTAAGCATAACCATTCTATAACAGGGACAAGATCTAAgacttttgcatttgttttgactTGCTATAAAGATCaattttgtgattatttataACTGCTTAGCATGCTTTATTCAATGTTTGTGGGA

Function

GO: NA

KEGG:

id description
K08830 RAGE, MOK; renal tumor antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000374 True 2117 mRNA 0.47 12 12885744 12896450

Neighbor

gene id symbol gene type direction distance location
AMCG00000379 LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 coding downstream 38523 12833200 ~ 12847221 (-)
AMCG00000378 NA coding downstream 55594 12826593 ~ 12830150 (-)
AMCG00000363 NA coding downstream 331005 12549230 ~ 12554739 (-)
AMCG00000364 NA coding downstream 368545 12489183 ~ 12517199 (-)
AMCG00000362 NA coding downstream 414251 12460630 ~ 12471493 (-)
AMCG00000373 NA coding upstream 15722 12912172 ~ 12919957 (-)
AMCG00000372 pole2 coding upstream 24933 12921383 ~ 12932189 (-)
AMCG00000375 NA coding upstream 54425 12950875 ~ 12952176 (-)
AMCG00000371 NA coding upstream 58536 12954986 ~ 12964206 (-)
AMCG00000382 NA coding upstream 241336 13137786 ~ 13146523 (-)
G149942 dync1h1,LOC107568493 non-coding downstream 60463 12817780 ~ 12825281 (-)
G149802 NA non-coding downstream 540034 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 581401 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 727273 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 787253 12090647 ~ 12098491 (-)
G149994 NA non-coding upstream 46136 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 50866 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 53475 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 70510 12966960 ~ 12968715 (-)
G150072 NA non-coding upstream 703384 13599834 ~ 13682131 (-)
G149847 NA other downstream 343434 12522520 ~ 12542310 (-)
G149751 NA other downstream 802530 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 1037796 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1076919 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2826744 10029727 ~ 10059000 (-)
G150138 NA other upstream 927504 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1106626 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1349367 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 1673512 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 2227575 15124025 ~ 15137923 (-)

Expression


Co-expression Network