AMCG00000378


Basic Information

Item Value
gene id AMCG00000378
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12826593 ~ 12830150 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000378
GGTGCAGTGCCCGTCCTTCGCCTTGCGGGGGCGCCAGAACACAGCTTTCTAATACGCGGCGGCCAGGATGTCGGCTAGGCGTAGAAAGCGGAGGCAGAAACGGGCGGTGCAAGGGTTCGGTGATGGGAAAGATGGGCGTAAATGTTCGGAGAGCGTGGAGAGGCTGGCATTCAAATACATGGAGAAGTGTAAAGTGGAATCGAGCACGGACTCTGACTCTGACACAAGTCCCGAGGGATGCGTCTCCAGCACACCTGAGAGCGGAGCTGCCAGGAAGGTGCTGCCTGTAGGACAGGCCAGAGGGGGACGCTATCACCTGCCATCGCTGGACCCGTACGACGGCAGCTCCGAGGACTCCTCTGATGAGTCCGACGGCAACTCCCGGAGGCAGCGGCAGGGGGGAAGCGTCCCCAGGGTCCGGGGCCAGACAGGGGGCTCCAGCTCGGTCTCATTCCCGAAAGACCCTGGAAAAAGTGCCCCCTCTGTGAAGCTGGGCGAGTTGCAGCCCCCAACGGACATCCAGATGAGGTCCTCCAGTGACTCGGAGGTCAGAGCGGGAGAGCCCGTTTCTCCGAGGGGCCGCGAGGGCTGTGGAGACATGCCTGTGGACTCGGGGGTGCACACCGAGTCCTCCCTCTCCACCCCGGGACAGTTTGCCTTTGTGAGCCTGACCCCGGTCCGGCTGCCCGAGAGCCCCTCATACAGGAGCCGGGCCGGCCCTCGCAGGACATACCCGAGACCCCCCGAGGAGGTCCCCGACAGCCCTGCGCCACACGAGGCGTTTCCCAAGCGCAAGTCGGGCTTCCCAGGAGTGGAGGCAGGAGAGCGGGCTCTCAGGAAGAAGCAACGCACTGTCAGGACAGAGGACACCGAATGAGGCGCAGAAGTCCTTTAATGCTGCTGTTAATGAAGCTGTGGGTGTGCCTGCCTGTTGCCGTTTGGTAAATCGGTGATGCACTACAGTTTCCCCCAAAGCACTTTTTTGTTGGTATAAATAATGTGAATATTAGGGATGCTTTTGAAagtgttgttaaaatatatctaataccatatattttttttgttgtgttactaAAATGgtgaatgtaaataaatcttcaaatacaataaaaaaatactgcactGGGAACCACTTCTAAACAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000378 True 1143 mRNA 0.57 6 12826593 12830150

Neighbor

gene id symbol gene type direction distance location
AMCG00000363 NA coding downstream 271854 12549230 ~ 12554739 (-)
AMCG00000364 NA coding downstream 309394 12489183 ~ 12517199 (-)
AMCG00000362 NA coding downstream 355100 12460630 ~ 12471493 (-)
AMCG00000361 wars,LOC107088075,LOC103399041 coding downstream 398301 12423003 ~ 12428292 (-)
AMCG00000360 slc25a29,LOC101165114 coding downstream 411787 12404604 ~ 12414806 (-)
AMCG00000379 LOC108411468,LOC106916349,LOC103155534,LOC102218377,LOC107100299,LOC103457917,LOC108257813,LOC107378076 coding upstream 3050 12833200 ~ 12847221 (-)
AMCG00000374 NA coding upstream 55594 12885744 ~ 12896450 (-)
AMCG00000373 NA coding upstream 82022 12912172 ~ 12919957 (-)
AMCG00000372 pole2 coding upstream 91233 12921383 ~ 12932189 (-)
AMCG00000375 NA coding upstream 120725 12950875 ~ 12952176 (-)
G149942 dync1h1,LOC107568493 non-coding downstream 1312 12817780 ~ 12825281 (-)
G149802 NA non-coding downstream 480883 12345409 ~ 12345710 (-)
G149801 NA non-coding downstream 522250 12304000 ~ 12304343 (-)
G149763 NA non-coding downstream 668122 12157749 ~ 12158471 (-)
G149756 NA non-coding downstream 728102 12090647 ~ 12098491 (-)
G149994 NA non-coding upstream 112436 12942586 ~ 12946121 (-)
G149995 NA non-coding upstream 117166 12947316 ~ 12949350 (-)
G149996 NA non-coding upstream 119775 12949925 ~ 12950128 (-)
G150007 NA non-coding upstream 136810 12966960 ~ 12968715 (-)
G150072 NA non-coding upstream 769684 13599834 ~ 13682131 (-)
G149847 NA other downstream 284283 12522520 ~ 12542310 (-)
G149751 NA other downstream 743379 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 978645 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1017768 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 2767593 10029727 ~ 10059000 (-)
G150138 NA other upstream 993804 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 1172926 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 1415667 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 1739812 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 2293875 15124025 ~ 15137923 (-)

Expression


Co-expression Network