AMCG00000389


Basic Information

Item Value
gene id AMCG00000389
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 13604129 ~ 13607997 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000389
GCTTAATGATGATGTCATGCAGAGCGACAAAGTTTAGATATGTTAAACGCACAGGAGGAGGCAGGGCAGGATGCTCCAGCGCGGTGGTGGCTGTGTCAGTTGTTCAGCTCCCGCAGGAGATATGGCTTCACGTATTCAGACTCCTCACTGCCCAGGAGAAAGGGGTTGTTCGTGCCACCTGCTGGTACTTCAAGCAGCTGATAGACCAGTCAACCCTGTGGAAGAACAGCAAGGTGGTGTTGAAGAAAATCGACGCCTATAACCCAGCCTTCTGGGCCACGTTGCGTAAGAGGGGAACCAGCGCTGTGGTAGTGCGGAAGATGGGCACGAAGCAGTGGAAGCAGCTGGCCACGAAGATGCCTTGGGTCACAGCACTAGCTATAGAGGAATGGTCGGATGGCAATGTTCTTGCGACCCTGCCGCAGTTTATGAACCTCAAGAAGCTGGTTATCAGAAGTTCTCACTGCCCTCCGGGACTGCATGACCTCTTGGCCTCTCTGCAACAACTCACTCACCTCACGCTGTGCCAGTTTGATTGCCCGCAGAGAGCACAGCTCATAGACACTGTTTCTCGCCTGACTCATTTGAACTCGCTGGTTTTCCATGAAGGTTTGGAACACATTCCTACGCATGCTTTCCACAGCTTGCTGTCTTCCCTGCCCAACCTGAAAGAGCtttcattaaatgtgaaaacattttcttataaaCCCCTGCCAGCTGATTATTTTGTGCTGCCCAAAAGCATTAATGAAATTGAAGAGCCGTATGTTCCTCAGCTTGGACTGACTAAGCTGGAGCTTCTGAATTACAAGGATTCCTTCCTCTCCCAGTCATCCATAGAGCAGCTGTCTGCCCTCCGGAGCCTGGCCATTCATTTCGAGGACCACACAGCCGCTCCTAGCTTGACAACGTTGTTGAGTAATCTCCCATGTTTGAAAGAACTCACAGTCCAACGAGGCGGTCCCTTCAATGTCTATGTAGGGTCAATTCCAGCCACCCTGGACAGCCTGTCTCTGTCTGGGGTGTTCGTCAGCTTAGAAGACATGAGGACTCTGAGCAAACAGGCAGCCGGTCTGAGGCACCTTCACATGGACCTCAGTGTTAATAGCACCCATCTGAGTGTGCTCGACTTTCCCCAGCTCTTCCCACACCTGAGGACCCTCCAACTTCGACATTGTAACGTGACCAAGGAGGAGTTGCTCGGCCTCGCTCGGCTACACTACCTGGAGAAGCTGGCAGTGCTGGGTTCGTGTCCCCTTGGGATGATCCAGGACTTCAAGATCCTCACAGACAACAGGGTCCAGCTGCTCCAGTCTTTATTGCCTCTGGATCACATGACCTGCCTTTGCATGCAGGGCTGAACCCTCTTTGACAGGAGCAGTGTTGCAAACTAACTCCAGTCCAGTGAGCAGTCATTGCCTGTATGATATTCCACACAGCAAACTTAAAACAgccattttttttgtattatgtattacaggacttgtttattttcttcttactTATGATCTGCTGATTgatcatcttttttttaaatctttttcatttgaattaattagaAGGGACTGTATCTGTTGAATACTaagtgattttcaaaaggggcaAAGTAACTTCTAAAATCTCATTCAGTCCCTTAACTCCTTTCAAATggattatataaaatgtatccacATTTTGCACCTTGttaaacatacaaatgtaatgattctatttaattaattgtgttctAATCCATGCAAATCATACTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000389 True 1749 mRNA 0.48 5 13604129 13607997

Neighbor

gene id symbol gene type direction distance location
AMCG00000383 NA coding downstream 377694 13146530 ~ 13226435 (-)
AMCG00000382 NA coding downstream 457606 13137786 ~ 13146523 (-)
AMCG00000371 NA coding downstream 639923 12954986 ~ 12964206 (-)
AMCG00000375 NA coding downstream 651953 12950875 ~ 12952176 (-)
AMCG00000372 pole2 coding downstream 671940 12921383 ~ 12932189 (-)
AMCG00000390 NA coding upstream 18386 13626383 ~ 13652135 (-)
AMCG00000391 NA coding upstream 76030 13684027 ~ 13687008 (-)
AMCG00000400 NA coding upstream 83932 13691929 ~ 13693526 (-)
AMCG00000399 NA coding upstream 86681 13694678 ~ 13701429 (-)
AMCG00000398 NA coding upstream 99786 13707783 ~ 13729942 (-)
G150007 NA non-coding downstream 635414 12966960 ~ 12968715 (-)
G149996 NA non-coding downstream 654001 12949925 ~ 12950128 (-)
G149995 NA non-coding downstream 654779 12947316 ~ 12949350 (-)
G149994 NA non-coding downstream 658008 12942586 ~ 12946121 (-)
G149942 dync1h1,LOC107568493 non-coding downstream 778848 12817780 ~ 12825281 (-)
G150083 LOC100846954,LOC107575789 non-coding upstream 41396 13649393 ~ 13650005 (-)
G150084 NA non-coding upstream 59565 13667562 ~ 13668139 (-)
G150086 NA non-coding upstream 79774 13687771 ~ 13688177 (-)
G150115 NA non-coding upstream 131799 13739796 ~ 13746130 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding upstream 148519 13756516 ~ 13761597 (-)
G149847 NA other downstream 1061819 12522520 ~ 12542310 (-)
G149751 NA other downstream 1520915 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 1756181 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1795304 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 3545129 10029727 ~ 10059000 (-)
G150138 NA other upstream 215957 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 395079 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 637820 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 961965 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 1516028 15124025 ~ 15137923 (-)

Expression


Co-expression Network