AMCG00000391


Basic Information

Item Value
gene id AMCG00000391
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 13684027 ~ 13687008 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000391
ATGAGCGGAAAGCAGAAGACCTTGTTTCAGACTTGGGGATCAGCCGTCCCTGCAAACGTGGGCAACCGAGATCCAGCCGCCGGGCACAGGCTGCCAGTGAAGCGTAAGGCCGGGCCGAGCAGTGGGGCAGGGAAACCCAAAGAGAAGACCCAGGCTATAGCTTCAGCGAGCCGTCCTTCACTGTGGGGACAGATCGGCAAGTCTAACTCTGCAGACTGTGGCTTTGAgaatgaagatgatgatgatgacttgATGTTAGTGGCTGTTTATGAAGCGGAAAAAAGCTTGCAGAGCGTTTCCCACACCTGGCAGGAAGATGATGCCAAGGCCAAGTCCACTCCACTTCCAAGTGTCCCTTTGCCTGttgctgccaccaccaccaccacagcgTGCCCTGAAGACCTGCCTGGCTTTGACCCCTCCTCAGCTGATGTGTGGATCTACCCCACCAACTACCCAGTCAGGGACTACCAGCTGAAGATCTCAGAAGCGGCCCTCTTCCAGAACACCCTGGTGTGCCTGCCTACTGGGTTGGGAAAGACATTCATTGCCTCGGTGGTCATGTACAACTTCTACAGATGGTACCCTTCCGGGAAAATTGTGTTCATGGCTCCCACGAAGCCCCTGGTAGCCCAGCAGATCGAAGCGTGCTACAAGGTTATGGGAATCCCCCAGGAACACATGGCGGAGCTGACAGGAAGCACTCAGGCGCAGACCCGGAAGGAGATCTGGAGGTCCCGGCGTGTGTTCTTCTTGACGCCCCAGGTGATGGTGAATGACCTGTCCCGAGAGGCTTGCCCCGCCCCTCAAGTCAAGTGTGTGGTGATTGACGAGGCCCACAAGGCCCTGGGCAACCATGCCTACTGCCAGGTGGTGAGGGAGCTGGGGAGCCACAGACGGCAGTTTCGTATCTTGGCCCTGAGTGCCACTCCAGGCAGCGACACTAGGGCAGTGCAGCAGGTGATTTCCAACCTCCTGATCTCTCACATCGAGCTGCGCTCCGAAGAGAGCCCCGACATCCAGGCCCACTCTCACCGGCGCAGCCTGGAGAAGATGGTGGTGCCGCTGGGAGAGGAGCTCTTGGGATACCAGGCCCGCTACCTGCAGGCAAGTTCTCCAATAGTGCGCCTGTTTGTCAAGTTTGGTCTGGCATGA

Function

GO: NA

KEGG:

id description
K10896 FANCM; fanconi anemia group M protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000391 True 1155 mRNA 0.58 5 13684027 13687008

Neighbor

gene id symbol gene type direction distance location
AMCG00000390 NA coding downstream 31892 13626383 ~ 13652135 (-)
AMCG00000389 NA coding downstream 76030 13604129 ~ 13607997 (-)
AMCG00000383 NA coding downstream 457592 13146530 ~ 13226435 (-)
AMCG00000382 NA coding downstream 537504 13137786 ~ 13146523 (-)
AMCG00000371 NA coding downstream 719821 12954986 ~ 12964206 (-)
AMCG00000400 NA coding upstream 4921 13691929 ~ 13693526 (-)
AMCG00000399 NA coding upstream 7670 13694678 ~ 13701429 (-)
AMCG00000398 NA coding upstream 20775 13707783 ~ 13729942 (-)
AMCG00000397 clg15h14orf28,LOC106581668,LOC106610876 coding upstream 59171 13746179 ~ 13752105 (-)
AMCG00000405 NA coding upstream 103658 13790666 ~ 13792970 (-)
G150072 NA non-coding downstream 1896 13599834 ~ 13682131 (-)
G150084 NA non-coding downstream 15888 13667562 ~ 13668139 (-)
G150083 LOC100846954,LOC107575789 non-coding downstream 34022 13649393 ~ 13650005 (-)
G150007 NA non-coding downstream 715312 12966960 ~ 12968715 (-)
G149996 NA non-coding downstream 733899 12949925 ~ 12950128 (-)
G150086 NA non-coding upstream 763 13687771 ~ 13688177 (-)
G150115 NA non-coding upstream 52788 13739796 ~ 13746130 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding upstream 69508 13756516 ~ 13761597 (-)
G150219 NA non-coding upstream 464580 14151588 ~ 14153846 (-)
G150306 NA non-coding upstream 808451 14495459 ~ 14495660 (-)
G149847 NA other downstream 1141717 12522520 ~ 12542310 (-)
G149751 NA other downstream 1600813 12081543 ~ 12083214 (-)
AMCG00000336 NA other downstream 1836079 11840480 ~ 11847948 (-)
AMCG00000334 NA other downstream 1875202 11787089 ~ 11808825 (-)
AMCG00000300 NA other downstream 3625027 10029727 ~ 10059000 (-)
G150138 NA other upstream 136946 13823954 ~ 13826709 (-)
AMCG00000409 exoc5 other upstream 316068 14003076 ~ 14028927 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other upstream 558809 14245817 ~ 14261332 (-)
AMCG00000436 NA other upstream 882954 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 1437017 15124025 ~ 15137923 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011150 CABZ01079748.1 coding NC_007128.7 CM002901.2 654759 ~ 686887 (+)