AMCG00000418


Basic Information

Item Value
gene id AMCG00000418
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14343537 ~ 14350726 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000418
CCGCTCTTGATTCAGTGGGTTTCAGAAACTCCTCGACCATGTGAAACACGTTATAAACACTGCAGCGAGCGTCCGGTGCGGGTTGCTGGGAttactttttgtaattaataaatcattacGGGAAAAAGGGCGATGTTTTGGGTCGTCCTGGGTGTGTGCTTTTGCGGAAACCGTGATCGTTTCCAGGGCTATTTCCTGTTTGCGGGAGCACGCCTGTCACATGTGTTCATACCGCAGATGGCGCAGTGTTTACGGTGACTGCCTGTCAGAGAGGCACGTAGCCCGCGCACTTGTTTTAACCATGCAAGACAGCCACGGTGCACCGGCTCTGTGAAACTGGATGACTGCACTTCTGTTTGGATATTTAGTCTTTTTACTCAACCAAATGCCGCACATCAAAGCATCAAATGCACGCAAAAGCAAAAGACCAAAACTGGACCTTCAGTTCCTGCAGAGGTTTGGTGGCATTCAGAGAATCCTGTTCCCCTCCTGGtcctcccagaatgcactgatGTTCGCCACGCTGCTGTTTGTCACTCTCCTTGAGCAGCTAATTATCTACCAGGTCGGGGTCATTCCGAGCAAGTACTATGAAGCCTTATCTGACAAGGACCTTGGTGGATTTAAAGCCCTCACAGTGGTTGCGATCCTCTTAATTGTATTGAACTCCACGCTGAAGAGTCTGGACCAGTACATCTCGAGCCTGATGTATGTGAGCTGGCGGAAGAGCCTGACGGAGCACCTGCACCGCGATTACTTCCAGGGCAGAGTGTACTACACCCTAAACGTGCTGCGCAAGGATATAGACAACCCagaCCAGCGGATCAGTCAGGATACGGAGAGGTTGTGTAAGCAGATGAGCACCATGGCCAGCAGGCTGATTGTGTCTCCGTTCACTCTGTCCTATTACACCTACCAGTGTTTCTACAGCACTGGCTGGATGGGGCCTGTGAGTATTTTCGGCTACTTTGTCATCGGGACCATCGTGAACAAAGTGCTGATGGGCCCCATTGTGTCGACACTGGTCGAGCAGGAAAAACTGGAAGGGGATTTCAGGTTCAAACACATGCAGATCCGGGTCAACGCGGAGTCGGCAGCTTTCTACAGGGCAGGGAAGGTGGAGCACATGAGGACCGACAGGAGACTGCAGACCCTCCTGCACACCCAGAGGAACCTGATGAACAAAGAGTTCCTGTTGTACAGTAAGAATCAGGACAGCACTGGGGCGGCTGGGAAGGGATATGGAGTTGGAGTGAACACTTTCGACTACCTGGGCAGCATCCTGAGCTACATAGTGATCGCCATTCCCATATTTGCCGGAGTGTTCAACAGCCTGACCCCCGGCGAGCTGAGCGCACTTATTAGCAAGAATGCCTTTGTCTCCATTTACTTGATCAATGGCTTCAGCCAGCTAATAGACCTGTCCACCACAGTGTCTGATGTGGCCGGATATACTCACAGGATCGGGGAGCTCAGGGAGGTGATGGAGGACATCATTAAGAAGCAGTGTGACTACGATCCCACGTCGGGGGAGTCCTTCGACTTTGACAGTGATGTGGAGCACCGGGCCAACTCCACAGACACGGCATTCATTCTGGACCGGCTGTCCTACAAGTCACCCTTCTCTGACGAGCTGCTGGTGAAAGAGCTCAGCTTGAAAGTCACTCAGGGGAACAGCCTGCTGGTGGTGGGGAACACTGGCACTGGAAAGACCTCCCTACTGAGGGTCCTCAACAGGCTGTGGGAGAGTTCAAGCGGCTACGTGGAGATGACTTCCTGTTTTGGGCCTCGGGGGATTCTCTTCCTGCCGCAGAAGCCCTACCTCACCGATGGGACCCTGAGGGAGCAGGTTATCTATCCTTTGAAGGACATTTACCCTGTCGCAGGTTCTCCCGATGATGAGAGAATAATGCGATTTCTAGAGCTGGCAGGAGTGGAGAGTCTCTTGAAAAGGACGGGCGGATTGGATGAGAAAGTCGACTGGAACTGAGGCTGTGCTTTGCCCGACTTTTCTATCtacagccgaaatacgcagACTGAGACAGTGGCCTGGGGCAGTGCTCAGGTGCTCAGTGGACGCCGtgtctgtgttgcagtgctCGATGAGGCGACCAGTGCCCTGACcgaggaggcggaggagcaGCTGTACCGCGCGTGCAAGCAGCTGGGCATGACGCTCATCAGCCTGGGCCACCGCAGCAGCCTGGACAAGTATCACGAGTGGAAGCTGAGGctctgtggaggagggcgatgGGAGCTGACCAAACTGAAGAATGAGTGAACAGCATTGTGGGATACGATAACCGTGCGAACAATAAAGGCATTGTGATCCTACCGAAGGGAAATTACTGCAGTACTCACTGGATGGGTAGAAACTTGGGAATATAGACTGGAATATATTCacatattgcatgttttttacatgtttacaaTGATTGCATTTATCTGACTTCTCACAGATTTCGTTTTTATTAAAGATTGCTTGTCATACGGATA

Function

GO: NA

KEGG:

id description
K05678 ABCD4, PXMP1L; ATP-binding cassette, subfamily D (ALD), member 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000418 True 2496 mRNA 0.52 19 14343537 14350726

Neighbor

gene id symbol gene type direction distance location
AMCG00000426 aldh6a1,LOC107664467 coding downstream 57927 14275972 ~ 14285610 (-)
AMCG00000427 NA coding downstream 108370 14230719 ~ 14235167 (-)
AMCG00000428 NA coding downstream 128619 14212669 ~ 14214918 (-)
AMCG00000413 NA coding downstream 176535 14165881 ~ 14167002 (-)
AMCG00000414 NA coding downstream 250253 14082501 ~ 14093284 (-)
AMCG00000415 NA coding upstream 51350 14402076 ~ 14418666 (-)
AMCG00000434 NA coding upstream 188359 14539085 ~ 14542043 (-)
AMCG00000435 gskip,LOC102795054 coding upstream 196547 14547273 ~ 14547995 (-)
AMCG00000441 gstz1 coding upstream 235155 14585881 ~ 14590832 (-)
AMCG00000440 NA coding upstream 248561 14599287 ~ 14659880 (-)
G150219 NA non-coding downstream 189691 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 581940 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 597407 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 655360 13687771 ~ 13688177 (-)
G150084 NA non-coding downstream 675398 13667562 ~ 13668139 (-)
G150306 NA non-coding upstream 144733 14495459 ~ 14495660 (-)
G150427 NA non-coding upstream 539808 14890534 ~ 14891706 (-)
G150476 NA non-coding upstream 878171 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 899899 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 910661 15261387 ~ 15263576 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 82205 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 314610 14003076 ~ 14028927 (-)
G150138 NA other downstream 516828 13823954 ~ 13826709 (-)
G149847 NA other downstream 1801227 12522520 ~ 12542310 (-)
G149751 NA other downstream 2260323 12081543 ~ 12083214 (-)
AMCG00000436 NA other upstream 219236 14569962 ~ 14572432 (-)
AMCG00000457 NA other upstream 773299 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 862676 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 938577 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 1111120 15461846 ~ 15479049 (-)

Expression


Co-expression Network