AMCG00000436


Basic Information

Item Value
gene id AMCG00000436
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14569962 ~ 14572432 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000436
ATGGCAGCTTTCAGTCACTGGAGCTGCGATGAGGTCTCGAAATGGGTCGAATCCATAGGATACCCCCAGTATACGGCATGTTTTACAGACAATCTCATCAATGGTAGAAAATTGATCTTAATTAATTGCTCCACACTTCCTAGAATAGGAATCACAGATTTTGAGGATATGAAGGTTATTTCGCGACAGATTCGGGAGTTGCTGAGCATAGAAGAGCCAAGGTGGAACAGGAGCATAGCCCTCCCCCCCAGAGACACTATGGGTTTATATTTAGAGATAAGGAGTCGGACGGGAATGCGTGCTGATTCTCTAACTTACAGCCAGTTTCTGAAGAGCACAAACTAA
>TU189195
ACTAGAGGTGCTTTTCGGTTACTATAGCCAGGCAGTGTCCTTAGAAACAGGTACACAAGCAAGATGGCAGCTTTCAGTCACTGGAGCTGCGATGAGGTCTCGAAATGGGTCGAATCCATAGGATACCCCCAGTATACGGCATGTTTTACAGACAATCTCATCAATGGTAGAAAATTGATCTTAATTAATTGCTCCACACTTCCTAGAATAGGAATCACAGATTTTGAGGATATGAAGGTTATTTCGCGACAGATTCGGGAGTTGCTGAGCATAGAAGAGCCAAGGTGGAACAGGAGCATAGCCCTCCCCCCCAGAGACACTATGGGTTTATATTTAGAGATAAGGAGTCGGACGGGAATGCGTGCTGATTCTCTAACTTACAGCCAGTTTCTGAAGAGCACAAACTAAGCACTCCCCACATCGCCtctttcacttaaaataaagcatgCTGAGATTGGATGAGCACATGATGTTCCTTCCAGACTTACATTGATTGTTATTAAATTGCAGAGTGCAGCACAACTAAAAAGCTAGTGGTTTAGTTTTAAATGCTGTGCGTATGTGGTGATTGTTAAAAATTAAACCCAGGGTGCTTTCAATACAAAGTAATATGATGCAAACACTGGCATGGCTCAAACTAtcaatacaatgaatacatagatagttttgtgtcatattttattataagatttataaataaaaagcttgcaaagagtgcattttaaatcttaaaaataaatgccctacttctgcttttgtgtgtgaCAAATGATGAAAACAAGATGATAATAAAGCTGGCAAAGTAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000436 False 345 mRNA 0.45 3 14570363 14572369
TU189195 True 809 TUCP 0.39 3 14569962 14572432

Neighbor

gene id symbol gene type direction distance location
AMCG00000435 gskip,LOC102795054 coding downstream 21967 14547273 ~ 14547995 (-)
AMCG00000434 NA coding downstream 27919 14539085 ~ 14542043 (-)
AMCG00000415 NA coding downstream 151296 14402076 ~ 14418666 (-)
AMCG00000418 NA coding downstream 219236 14343537 ~ 14350726 (-)
AMCG00000426 aldh6a1,LOC107664467 coding downstream 284352 14275972 ~ 14285610 (-)
AMCG00000441 gstz1 coding upstream 13449 14585881 ~ 14590832 (-)
AMCG00000440 NA coding upstream 26855 14599287 ~ 14659880 (-)
AMCG00000438 arel1,LOC107704359 coding upstream 165025 14737457 ~ 14751940 (-)
AMCG00000450 NA coding upstream 208770 14781202 ~ 14790208 (-)
AMCG00000452 NA coding upstream 238485 14810917 ~ 14821481 (-)
G150306 NA non-coding downstream 74302 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 416116 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 808365 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 823832 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 881785 13687771 ~ 13688177 (-)
G150427 NA non-coding upstream 318102 14890534 ~ 14891706 (-)
G150476 NA non-coding upstream 656465 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 678193 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 688955 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 698964 15271396 ~ 15273123 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 308630 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 541035 14003076 ~ 14028927 (-)
G150138 NA other downstream 743253 13823954 ~ 13826709 (-)
G149847 NA other downstream 2027652 12522520 ~ 12542310 (-)
G149751 NA other downstream 2486748 12081543 ~ 12083214 (-)
AMCG00000457 NA other upstream 551593 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 640970 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 716871 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 889414 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 925740 15498172 ~ 15527390 (-)

Expression


Co-expression Network