AMCG00000451


Basic Information

Item Value
gene id AMCG00000451
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14822861 ~ 14824609 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000451
ATCAGGAACATGACATTAGTGGTGAACCGGCTCGAGAGATACGACAAGAACAACCTGCTGGTGATGCAGCATGAGTTTACTAAACTGCAGAAGAAACTGGAGGAGTGCCAGAAGTGGCATGAAGAGTCTTCCAAACCTAATATTGGATTCTGTAATCACGCAGGCATTTCTAACATCAGCAAGCCATATATAGTCCAGCTAAATGCACATATCAATGAGGGATACCTTCATGGAGGTTGGGGGAAAGATTCAAAGCCAAAGCCGGGCTTTGAGGAGATGTACTGGTATTCAGGGTATACTACCCCCTACACCTACAACCTGTACCTGTACTCAGACTACACCAACCTGCTCTTaagaaatcaatttaaatattttgataatacCCTGAAGGGGAATGGCATTAATAACATAATGCATGGGAATTACTACTATTATAACTGCTATAATACtggaaatctgtgcagaatgaatGCAACGACGTTTGAGGTCGAGACCAGAGTGTTCCCTGATGCTGCCTGGAACAACAGGTTCTCCTACAGTTCTGCCACGTACCAGGATTTTGACTTTGCAGCCGATGAAAACGGGCTGTGGGTCATTTATGCAACAGAAGCCAGTAAGGGTAACATGGTCCTATCCAAAATGAATGTAGATGGTTTTTCAGCACAGCAGACCTGGGTGACAAATGTATTTAGGCGGAGCGTTAGTAATGCTTTCATGGTGTGTGGTGTTCTGTATGCCACGAGACAAATGAATCTTTACACTGAGGAGGTATTCTATAAATTTGATACTAAGACAGGTAAGGAGAGTTATATAAGCATTCCTTTCAATAAGCAATATGAAGTATTTGTGTACCTTGATTACAACCCTGCGGATCAGAGGCTTTACATGTATAGCAAAGGCTACTACATCTATTACAATGTAAAATTCGAAATGATATAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000451 True 939 mRNA 0.42 2 14822861 14824609

Neighbor

gene id symbol gene type direction distance location
AMCG00000452 NA coding downstream 1380 14810917 ~ 14821481 (-)
AMCG00000450 NA coding downstream 32653 14781202 ~ 14790208 (-)
AMCG00000438 arel1,LOC107704359 coding downstream 70921 14737457 ~ 14751940 (-)
AMCG00000440 NA coding downstream 162981 14599287 ~ 14659880 (-)
AMCG00000441 gstz1 coding downstream 232029 14585881 ~ 14590832 (-)
AMCG00000454 NA coding upstream 14630 14839239 ~ 14858988 (-)
AMCG00000455 NA coding upstream 35730 14860339 ~ 14860824 (-)
AMCG00000453 NA coding upstream 38147 14862756 ~ 14868657 (-)
AMCG00000444 vash1,LOC106589786 coding upstream 56641 14881250 ~ 14890530 (-)
AMCG00000445 esrrb coding upstream 115136 14939745 ~ 14943179 (-)
G150306 NA non-coding downstream 327201 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 669015 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 1061264 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 1076731 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 1134684 13687771 ~ 13688177 (-)
G150427 NA non-coding upstream 65925 14890534 ~ 14891706 (-)
G150476 NA non-coding upstream 404288 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 426016 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 436778 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 446787 15271396 ~ 15273123 (-)
AMCG00000436 NA other downstream 250429 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 561529 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 793934 14003076 ~ 14028927 (-)
G150138 NA other downstream 996152 13823954 ~ 13826709 (-)
G149847 NA other downstream 2280551 12522520 ~ 12542310 (-)
AMCG00000457 NA other upstream 299416 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 388793 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 464694 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 637237 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 673563 15498172 ~ 15527390 (-)

Expression


Co-expression Network