AMCG00000453


Basic Information

Item Value
gene id AMCG00000453
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14862756 ~ 14868657 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000453
ATGTCTCACACCAGCCTGTCGATTGAGGCCCTTTGTCTGGAGAGTGGGCACTGCGCTCGAGGAGAGGAGCCGGGCAGTGGCGAGGAGTGGGACACGGACCTGGAGGAAGACGAAGTGGCCGAGAGCAGCGGTGTCTCTGCCCGTGACCTCTACCTGCAGGCCTGTCAGCTGGTGGGTGTGGTGCCAGTTTCCTACTTCCTGCGTAACCTTGGCTGCAACAGCAACCTCAACCTCAACCACCATGGGCTGGGGCCCCGGGGGGCCAAGGCGCTGGCTATAGCTCTAGTTAGTGATGTGACAATCACTACCCTTGAATTGGAAGACAACGGTCTGCAAGCAGAGGGTGTGAAATACCTGGTGGAGATGTTAAAGGCAAACTGCACAATTCAGAATCTGaatCTCTCCAATAACCACTTGCAGTCTGCAGGTGCTGACTATATCTCCAGAATGTTGCTTGACAACATTTCCCTCAGATCACTAAAACTGTCAGGAAATGAATTTAGAGAGGAGGATGCCAAGAGTCTTTCAGATGCCTTTTCTAGCAATTACAGAGTCAGGGAGTTGGACCTGAGCCACAATGAGTTCATGGAGAAGGGTGGAGAGCACTTGGGCCAAATGCTAGCGAACAACGAAGGACTGGAGGCGTTGAACCTGAGCTGGAATCGGCTGCGGATGAAAGGAGCTGTGGCTCTGTGTGCAGGACTTAAGGTCAACATCACGCTGAAGGTCTTAGATCTGTCCTGGAACGGCTTTGGGAACGAAGGTGCCCTGGCTCTGGGCGAGGCGCTGAAGTTCAACAACACCCTGCTGCACCTGGACCTGAGCAGCAACCGCATCACCAATGAAGGGGCTGGCATGCTATGCAAAGGGCTGGAGGCCAACGACACGCTGAAAGTGCTGAGGCTGGCCTACAACTCGCTGACCGTGGAGGGTGCTCTGGCTCTGCTCACTGTGCTCTTGGAGGTGACCTGTCAGCAACACCAGGGCCTGGAGGTTCTCTATGGAGGGGTTGGGGGGTTCATCGCCAAGAAGCCACCTCAGCGCCCCGACCCCATGAAAGTCATTCAGGATTACTTAGACGAACGCAAGCTGCGCCTCTGGGACTTCTTCCGGAAGATCGATAAAGACGGATCGATGCGAGTGCCCGTCTCGGAGTTCAGGAAGGCCGTGCAGCAATCAAGCATTCCTCTGGATCGGTTCCAGATAGAGGAGCTAGTGCAGAGGCTGGATAAGGACAGGACTGGGAAAGTGGACTACAGGGGTCTGGCTGACACCAGGAAGCAGATGATGCGCGATCACCGGCGGCAGCTGCGGAAGGTAGAGTCCCggcagaagaaggagaagcaGAAAAGCGAGCGCATCCTGAAGACCTTCCAGAGTGCCGTGGAGGCCGTCACCCCCCGCAGCTCCATGGTGATTTCTCCGGGGGGCGCCAAGGATGAGTCTGGTGGGCCTCGGCACTTTTCTGCCACACCGCTCAGCTCCTGGCACCACGTGGTGATGTCAAACAGCAGCCGCTTTTCTGTTTCAAACCTGAGCAGTGATCATGTCCACGTCACACCCACCGGGGCCCAGCCTACCCCACTGtctgcctcctctccagagGCACACTCATATTCCCAGCCCAACCTCCTCTCCGAAGCCCGTGGGTCTCCCCCTGTCAAGGCGGTCTCGGCCCAGGGTCTTCATTCGACCTCGAACCCGGAAGTTTGCTCTTGCAATCTGAGCTCAGGATTCAACAGCTTGACCAGGTCCAGGCCAGCACTCACACCTCCCAAGAGGCAGGCTTCGAAAAGTCCTAAGAAGAAGtcctcaaaatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000453 True 1821 mRNA 0.56 13 14862756 14868657

Neighbor

gene id symbol gene type direction distance location
AMCG00000455 NA coding downstream 1932 14860339 ~ 14860824 (-)
AMCG00000454 NA coding downstream 3768 14839239 ~ 14858988 (-)
AMCG00000451 NA coding downstream 38147 14822861 ~ 14824609 (-)
AMCG00000452 NA coding downstream 41275 14810917 ~ 14821481 (-)
AMCG00000450 NA coding downstream 72548 14781202 ~ 14790208 (-)
AMCG00000444 vash1,LOC106589786 coding upstream 12593 14881250 ~ 14890530 (-)
AMCG00000445 esrrb coding upstream 71088 14939745 ~ 14943179 (-)
AMCG00000446 esrrb coding upstream 86011 14954668 ~ 14976422 (-)
AMCG00000442 NA coding upstream 173483 15042140 ~ 15065371 (-)
AMCG00000459 ift43,LOC106590872 coding upstream 223485 15092142 ~ 15108451 (-)
G150306 NA non-coding downstream 367096 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 708910 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 1101159 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 1116626 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 1174579 13687771 ~ 13688177 (-)
G150427 NA non-coding upstream 21877 14890534 ~ 14891706 (-)
G150476 NA non-coding upstream 360240 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 381968 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 392730 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 402739 15271396 ~ 15273123 (-)
AMCG00000436 NA other downstream 290324 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 601424 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 833829 14003076 ~ 14028927 (-)
G150138 NA other downstream 1036047 13823954 ~ 13826709 (-)
G149847 NA other downstream 2320446 12522520 ~ 12542310 (-)
AMCG00000457 NA other upstream 255368 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 344745 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 420646 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 593189 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 629515 15498172 ~ 15527390 (-)

Expression


Co-expression Network