AMCG00000454


Basic Information

Item Value
gene id AMCG00000454
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14839239 ~ 14858988 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000454
ATGCCATATATAGTCCAGCTGGGCGCACATGTCAATGAGGGTTACCTTCATGGAGGATGGGGAAAAGATTCAAAGCCGAAGCCGGGCTTTGAGGACATGTACTGGTATTCAGGGTATACTACCCCCTACACCTACAACCTGTACCTGTACTCAGACTACACCAACCTGCTCTTAAGAAAATCCTTTAAAAAGTTTGAGAACGACCGCAAGGGGAATGgcaataataacataattaatggAAATTACTTCTATTATAACTGCTATAATACtggaaatctgtgcagaatgaatGCAACGACATTTGCGGTCGAGACCAGGGTGTTGCCTGATGCTGCCTGGAACAACAGGTTCTCCTACAGTTCTGCCACGTACCAGGATTTTGACTTTGCAGCCGATGAAAACGGGCTGTGGGTCATTTATGCAACAGAAGCCAGTAAGGGTAACATGGTCATATCCAAAATTAATGTAGATGCCTTTTCAGTAGAACAGACCTGGGTGACAAATATATTTAGGCGCAGAGTCAGTAATGCTTTCATGGTGTGTGGCGTTCTGTACGCCACCAGACAAATAAACCTTAACATTGAGGAGATATTCTACAAATATGATACTAAGACAGGTAAAGAGAGTTATATAAGCATTCCTTTCAATAAGCAATATGAAGGATTTGTGTACCTTGATTACAACCCTGCGGATCAGAGGCTATACATGTATAGCAAAGGCTACTACATCTATTACAATGTTAAGTTCCACAAATTACAGCAACAgACACCAAAACACAAGAGAGCTGGGAGGACAACACTGAAGAACAATGGGTCCTGCTCTGCTCCTGTTTGCTCTCCTCAGATCTACGTTGGCCTGGGTGACCACTGGGGCTCTGGCAATGTGACTGCAGGTGCAGACGAGAACGGACAGTGTGTCTGTAAAGTGTTCCTGCCAGACACTAGTTTTCCAGGTGACAAAGTGGAACTCCTGCAAAAAACATCAATGGAGCTTAGCCAGAAAGTGGAGCTGGGATTGAGCAAGCTTGAACTCTACGAAAGCAAGCTGGTCATTTATGCCCAGAAGCTGGTGAACCTGACGATCCAGAACATGACATCAGTGGTGAACCAGCTCGAGAGATACGACAAGAACAACCTGCTGGTGATGCAGCATGAGTTCAGTAAACTGCAGAAGAAACTGGAGGATTGCCAGAAGTGGCACGATGAGTCTTTCAAGCCTGATATTGGATCCTGTAATCACGGAGGCATTTCTAACATCAGCATGCCATATATAGTCCAGCTGGGCGCACATGTCAATGAGGGTTACCTTCATGGAGGATGGGGAAAAGATTCAAAGCCGAAGCCGGGCTTTGAGGACATGTACTGGTATTCAGGGTATACTACCCCCTACACCTACAACCTGTACCTGTACTCAGACTACACCAACCTGCTCTTAAGAAAATCCTTTAAAAAGTTTGAGAACGACCGCAAGGGGAATGGCAATAATAACATAATGAATGGAAATTACTTCTATTATAACTGCTATAATACtggaaatctgtgcagaatgaatGCAACGACGTTTGCGGTCGAGACCAGGGTGTTGCCTGATGCTGCCTGGAACAACAAGTTCTCCTACAGTTCTGCCACGTACCAGGATTTTGACTTTGCAGCCGATGAAAACGGGCTGTGGGTCATTTATGCAACAGAAGCCAGTGAGGGTAACATGGTCATATCCAAAATTAATGTAGATGCCTTTTCAGTAGAACAGACCTGGGTGACAAATATATTTAGGCGCAGAGTCAGTAATGCTTTCATGGTGTGTGGCGTTCTGTACGCCACCAGACAAATAAACCTTAACATTGAGGAGATATTCTACAAATATGATACTAAGACAGGTAAAGAGAGTTATATAAGCATTCCTTTCAATAAGCAATATGAAGGATTTGTGTACCTTGATTACAACCCTGCGGATCAGAGGCTTTACATGTATAGCAAAGGCTACTACATCTATTACAATCTAAATGCACATGTCAGTGAGAGTTACCTTTATGGAGGATGGGGAAAAGATTCAAAGCCGAAGCCTGGATTTCAGGAGATGTACTGGTATTCAGGGTATACTAGCCCCTACACCTACAACCTGTACCTGTACTCAGACTACACCAACCTGctcttaagaaaacaatttaaatattttgataacGACCATAAGGGGTATGGCAATAATGACATAATGCATGGGAATTACTACTATTATAACTGCTATAATACTGGAAATCTGTGCAGATTGAATGCAACGACGTTTGCGGTCGAGACCAGAGTGTTCCCTGATGCTGCCTGGAACAACAGGTTCTCCTACAGTTCTGCCACGTACCAGGATTTTGACTTTGCAGCCGATGAAAACGGGCTGTGGGTCATTTATGCAACAGAAGCCAGTAAGGGTAACATGGTCCTATCCAAAATGAATGTAGATGCCTTTTCAGCACAGCAGACCTGGGTGACAAATGTATTTAGGCGGAGAGTGAGCAATGCTTTCATGGTGTGTGGCGTTCTGTATGCCACGAGACAAATGAATCTTTACACTGAGGAGATATTCTACAAATTTGATACTAAGACAGGTAAGGAGAGTTATATAAGCATTCCTTTCAATAAGCAATATGAAGGATTTGTGTACCTTGATTACAACCCTGCGGATCAGAGGCTATACATGTATAGCAAAGGCTACTATATCTATTACAAAGTTAAGTTCCAAAAATTGCAGCAACAggtttaaatatcaatatattcTCAAGAGTGACTTGTTTTCACATATCTACAATAAGACACATCAGTGATTACAACTGTGTTATTccttgaatgaataaatgaaatatgtaaGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000454 True 2859 mRNA 0.42 7 14839239 14858988

Neighbor

gene id symbol gene type direction distance location
AMCG00000451 NA coding downstream 14630 14822861 ~ 14824609 (-)
AMCG00000452 NA coding downstream 17758 14810917 ~ 14821481 (-)
AMCG00000450 NA coding downstream 49031 14781202 ~ 14790208 (-)
AMCG00000438 arel1,LOC107704359 coding downstream 87299 14737457 ~ 14751940 (-)
AMCG00000440 NA coding downstream 179359 14599287 ~ 14659880 (-)
AMCG00000455 NA coding upstream 1351 14860339 ~ 14860824 (-)
AMCG00000453 NA coding upstream 3768 14862756 ~ 14868657 (-)
AMCG00000444 vash1,LOC106589786 coding upstream 22262 14881250 ~ 14890530 (-)
AMCG00000445 esrrb coding upstream 80757 14939745 ~ 14943179 (-)
AMCG00000446 esrrb coding upstream 95680 14954668 ~ 14976422 (-)
G150306 NA non-coding downstream 343579 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 685393 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 1077642 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 1093109 13739796 ~ 13746130 (-)
G150086 NA non-coding downstream 1151062 13687771 ~ 13688177 (-)
G150427 NA non-coding upstream 31546 14890534 ~ 14891706 (-)
G150476 NA non-coding upstream 369909 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 391637 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 402399 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 412408 15271396 ~ 15273123 (-)
AMCG00000436 NA other downstream 266807 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 577907 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 810312 14003076 ~ 14028927 (-)
G150138 NA other downstream 1012530 13823954 ~ 13826709 (-)
G149847 NA other downstream 2296929 12522520 ~ 12542310 (-)
AMCG00000457 NA other upstream 265037 15124025 ~ 15137923 (-)
AMCG00000464 batf other upstream 354414 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 430315 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 602858 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 639184 15498172 ~ 15527390 (-)

Expression


Co-expression Network