Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000455 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 14860339 ~ 14860824 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000455 | True | 285 | mRNA | 0.49 | 2 | 14860339 | 14860824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000454 | NA | coding | downstream | 1351 | 14839239 ~ 14858988 (-) |
| AMCG00000451 | NA | coding | downstream | 35730 | 14822861 ~ 14824609 (-) |
| AMCG00000452 | NA | coding | downstream | 38858 | 14810917 ~ 14821481 (-) |
| AMCG00000450 | NA | coding | downstream | 70131 | 14781202 ~ 14790208 (-) |
| AMCG00000438 | arel1,LOC107704359 | coding | downstream | 108399 | 14737457 ~ 14751940 (-) |
| AMCG00000453 | NA | coding | upstream | 1932 | 14862756 ~ 14868657 (-) |
| AMCG00000444 | vash1,LOC106589786 | coding | upstream | 20426 | 14881250 ~ 14890530 (-) |
| AMCG00000445 | esrrb | coding | upstream | 78921 | 14939745 ~ 14943179 (-) |
| AMCG00000446 | esrrb | coding | upstream | 93844 | 14954668 ~ 14976422 (-) |
| AMCG00000442 | NA | coding | upstream | 181316 | 15042140 ~ 15065371 (-) |
| G150306 | NA | non-coding | downstream | 364679 | 14495459 ~ 14495660 (-) |
| G150219 | NA | non-coding | downstream | 706493 | 14151588 ~ 14153846 (-) |
| G150119 | arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 | non-coding | downstream | 1098742 | 13756516 ~ 13761597 (-) |
| G150115 | NA | non-coding | downstream | 1114209 | 13739796 ~ 13746130 (-) |
| G150086 | NA | non-coding | downstream | 1172162 | 13687771 ~ 13688177 (-) |
| G150427 | NA | non-coding | upstream | 29710 | 14890534 ~ 14891706 (-) |
| G150476 | NA | non-coding | upstream | 368073 | 15228897 ~ 15229292 (-) |
| G150485 | NA | non-coding | upstream | 389801 | 15250625 ~ 15250829 (-) |
| G150502 | NA | non-coding | upstream | 400563 | 15261387 ~ 15263576 (-) |
| G150504 | NA | non-coding | upstream | 410572 | 15271396 ~ 15273123 (-) |
| AMCG00000436 | NA | other | downstream | 287907 | 14569962 ~ 14572432 (-) |
| AMCG00000425 | entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 | other | downstream | 599007 | 14245817 ~ 14261332 (-) |
| AMCG00000409 | exoc5 | other | downstream | 831412 | 14003076 ~ 14028927 (-) |
| G150138 | NA | other | downstream | 1033630 | 13823954 ~ 13826709 (-) |
| G149847 | NA | other | downstream | 2318029 | 12522520 ~ 12542310 (-) |
| AMCG00000457 | NA | other | upstream | 263201 | 15124025 ~ 15137923 (-) |
| AMCG00000464 | batf | other | upstream | 352578 | 15213402 ~ 15222743 (-) |
| AMCG00000475 | NA | other | upstream | 428479 | 15289303 ~ 15291255 (-) |
| AMCG00000482 | NA | other | upstream | 601022 | 15461846 ~ 15479049 (-) |
| AMCG00000469 | LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 | other | upstream | 637348 | 15498172 ~ 15527390 (-) |
