AMCG00000466 (flvcr2,LOC108242486)


Basic Information

Item Value
gene id AMCG00000466
gene name flvcr2,LOC108242486
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15187199 ~ 15211871 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000466
ATGAACGAGACTGAAATAAACGATAACAAAGATGTCCCCAATTGTGACAAGTCGGTCCACACGGAGAAAGACCAGGACCCCCATCTGCTCGGTGACTTACAGAGACTCTCCAATGGCAGAGCCGACTCAGCCCCGGCCACCCGTCTGTACAAGAGGCGCTGGGCCATCGTGTGCCTGTTCAGCGCCTATTCCCTGTGCAACTCTTTCCAGTGGATCCAGTATGGCATCATCAACAACATCTTCATGCACTTCTACAGCGTGGACTCCTTCACCATAGACTGGATGTCCATGATCTACATGCTCACCTACATCCCCTTCATATTCCCCGTCACCTGGCTGCTGGACAAGAAGGGGCTGCGGGTCATCGCCCTGGCTGGAGCCGCCCTCAACTGCCTGGGCACCTGGATCAAGGTGGCCAGCGTGAGACCCGACCTGTTCGGGGTGACCATGTTCGGCCAGTTCTCCTGCTCCTTCGCCCAGGTCTTCATCCTCGGCATGCCGTCTCGGATCGCCTCGGTGTGGTTCGGCTCGGAGGAGGTGTCCACTGCCTGCTCCATCGGGGTCTTTGGCAACCAGGGGTATAACCTGGAGAAGCCCATGAAGACTGTGGAAAACTGTGGAACCAAACTGCTAGATCTCACAGATGGAGGAACCCCCATAACTGATCCAGAAATACCTCCTGAGGCCCCAAGGCAGGAACTAGCTGGTCCCAGCCCGGTTGCGGCCGTCCACCTGTACAAGCGGCGCTGGGTGATACTTTTCCTCTTCAGCTCCTACTCCATGTGCAACGCCTTCATGTGGCTGCAGTATGGGATCGTGAGCAACATTTTCATGAGGTTTTATAGCATAGACTCCTTCACCATCAACTGGCTGTCCATGATCTACATGCTCACCTACATCCCCCTGATTGTCCCCGTCATGTGGCTCCTGGACAACCGAGGCATGAGAGACGTGGTCATGGCTGGATGTGCTTTCAATTGTATTGGGGCCTGGATCAAAACCGGCAGCGCTGCCCCGAACCTCTTCGCGGTCGCCTTCTTTGGACAGTTCGTATGTTCTGTGGCCACTGTGTTCGTGCTGGGCATCCCCTCCCGGCTTGCCTCTCTGTGGTTTGGAGAGCAGGAGGTCTCTACGGCGTGTTCCATCGGTGTGCTAGGAAACCAGCTGGGCATTGCTATAGGATTCCTGGTGCCACCTATGCTGGTTCCTAACCTGCAAGACAATGACCAGCTGGCCCACTACATCAGCATCATGTTCTACGGGACGGCGGCCGTGGCGACCCTGCTTTTCGTCCTTGTCGTCATTGTCTTCCAGGAGAAGCCACCCATCCCACCCACCCAAGCCCAGGTTGCCATGAGGAATGTCCCGGAGGAGGATTACTCCTACATACAGTCCATCCTGCGCCTCCTCCGCAACATGCCCttcatcatcctcatcatctCCTACGGACTGAATGTTGGCTGTTTTTATGCTGTGTCTACCCTGCTGAACAAGATGATAATTGAGCACTACCCTGGTGAAGAGGTGAACGCTGGCAGGATTGGACTCACTATTGTCATCGCAGGGATGGTTGGGTCTCTCATCTGTGGCATTTGGCTCGACAAGACGAAAACCTACAAACAGACGACGCTGGCCGTGTACGTGATGTCCTTCATTGGGATGGTGGTGTATGCCTTCACTCTGGATCTGGGGCACTTGTGGGTGGTGTTCATCACAGCAGGCACGCTGGGATTCTTCATGACTGGTTACCTGCCCCTGGGCTTTGAGTTTGCAGTGGAGCTGACGTACCCCGAGTCTGAGGGCACCTCCTCGGGGCTTCTCAACTGCTCGGCCCAGGTGTTTGGCATCATCTTTACCATCTGTCAAGGCAAAATCATCGACCGCTTTGGGACGTTAGCTGGAAACATTTTCCTCTGTGCATTCCTTCTATTAGGGTCCATCATGACAGGTTTTATAAAGTCCGATCTCCGGAGGCAGAAGGCAAATCAGGCAGCAGCGGCCAGTGAGATGCTCAGTGTGTTCTCCAGAGCTTGCAACAGTAGGATAAGTGTGCGTAACGACACCTGCCCATTTAACAGCAAATCAGTCCTGGAAACCTGCCCAGCCTGGCAGCGTCTTGCGATGAAACCCCAGCAACTGGACAAATCCTGTCACTTATTCTTCACCTCTCCTGGCAATTATCTAtcttgttttttggttttccaTGTGCTGGGTGTGGGGAATTCATACGATTTGACCTTCTACAGTAATCTTGAATGTTACCTTGCTCGACTGGAGGGGGGTCACAATGTTGGTCTGAGCAGCGTGTTGGTGCTGCTGTGCGTGACCCCAGCTGTTGTTCCAGACTGCAGCTGCTGTCTCCCCACATCAGGATTATGGGGCCACAGCGCCCATCAACCCCCAGTTGCTGCACCCTTGATCACTAACCCAACCACACTAAACACAAAAACCTCAAGAAGGCGTTGCAGCCTTCCTGGCCCTGTGGCACGATGCGTGATGGGAAGCTGTCCGCATTTCCGCTCAATTGCGTTTCTTCTGCCTCGCCCCCACCACTTCCTGGGGTTCTGCCACGCACTGCAAGCCAATCAGCATCCCCACGATGGAGAAACCTGCCACAGTGAAGACGGGACCGTTATGGAGACCGATAAATCTGAATACTGA

Function

symbol description
flvcr2 Enables heme binding activity and heme transmembrane transporter activity. Predicted to be involved in heme export. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Implicated in proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome.

NR:

description
feline leukemia virus subgroup C receptor-related protein 2 isoform X3

GO: NA

KEGG:

id description
K08220 FLVCR, SLC49A1_2; MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000466 True 2661 mRNA 0.54 14 15187199 15211871

Neighbor

gene id symbol gene type direction distance location
AMCG00000458 ttll5 coding downstream 6682 15141396 ~ 15180517 (-)
AMCG00000459 ift43,LOC106590872 coding downstream 78748 15092142 ~ 15108451 (-)
AMCG00000442 NA coding downstream 121828 15042140 ~ 15065371 (-)
AMCG00000446 esrrb coding downstream 210777 14954668 ~ 14976422 (-)
AMCG00000445 esrrb coding downstream 244020 14939745 ~ 14943179 (-)
AMCG00000463 atf3,jdp2,LOC106611045 coding upstream 18417 15230288 ~ 15242153 (-)
AMCG00000467 NA coding upstream 41421 15253292 ~ 15255829 (-)
AMCG00000465 NA coding upstream 67618 15279489 ~ 15288455 (-)
AMCG00000476 NA coding upstream 86006 15297877 ~ 15309522 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding upstream 99130 15311001 ~ 15320215 (-)
G150427 NA non-coding downstream 295493 14890534 ~ 14891706 (-)
G150306 NA non-coding downstream 691539 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 1033353 14151588 ~ 14153846 (-)
G150119 arf6,arf6a,ARF6,arf6.2,LOC106608083,LOC105893149,LOC104956700 non-coding downstream 1425602 13756516 ~ 13761597 (-)
G150115 NA non-coding downstream 1441069 13739796 ~ 13746130 (-)
G150476 NA non-coding upstream 17026 15228897 ~ 15229292 (-)
G150485 NA non-coding upstream 38754 15250625 ~ 15250829 (-)
G150502 NA non-coding upstream 49516 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 59525 15271396 ~ 15273123 (-)
G150497 NA non-coding upstream 64092 15275963 ~ 15278056 (-)
AMCG00000457 NA other downstream 49276 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 614767 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 925867 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 1158272 14003076 ~ 14028927 (-)
G150138 NA other downstream 1360490 13823954 ~ 13826709 (-)
AMCG00000464 batf other upstream 1531 15213402 ~ 15222743 (-)
AMCG00000475 NA other upstream 77432 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 249975 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 286301 15498172 ~ 15527390 (-)
G150729 NA other upstream 1593324 16805195 ~ 16834326 (-)

Expression


Co-expression Network