AMCG00000467


Basic Information

Item Value
gene id AMCG00000467
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15253292 ~ 15255829 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000467
CAATGGTACAGCCTTACCGCACCGATTTCATTCATAAAAATCTGGCACAGTATAAAAGGAGGAGCCAGCAAACTCATCCAGCAGTTACCGGGTATGGGAACCTGGCAGAAGGACTACTGAGCAATCTACGAAGATTTTAACCAAGTCTGACTGGAAAGGGACATCTTGGcttctaatattttattttttgaataccACCAGCTTGCTACAGTTTCGTTCAGACATGTTTCCAAACTTTAGCACCGAGTACGACTCTTCTTCCCGCGGCAGTACGGCATCTCCTGCCGGGGACACCCTTCCGTACTATCAGCCGTCTCCCGACTGCTTCACCAGCTCCTCCGCCTCTCCGATGAATAACCAACAGGAAGGAAACTCAGGAGATGCTTCCACACTGCAAGACCTGGAGATCTCCAACCTTCCCACTACAGTTATTTCAGGGAATTCAAACATCTTGCTCTGCTCCAGTGCCGAGGTGAACCTTTGTGATCTCGAGCCTTCCTTAGATCTAAAAGAGGAGCCCCTTGACAATCTTCTACCTAACATGGACAAGAACCCCATGGAGACGGCCAGATCTGTCCCGGACATAGACTTGACCAGCTCTTTTGGAGTGACAGACTGGGAAACCCTTTATAAATCGGTGTCCAATGACCTCGAGCCCCTCAGCACCCCAATAGTGACATCCACTCCGACCTGCGGCAATTACTTACCATCTTTTGCATTTACCTACCCAGAGTTTGATTCTTTTACTGACAATCTCAAAGGTGTAGTCGGCAAGACTGATTCTGCATTAGATATCCTGAATTCACCAACACTTTTAGCcttataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000467 True 826 mRNA 0.47 2 15253292 15255829

Neighbor

gene id symbol gene type direction distance location
AMCG00000463 atf3,jdp2,LOC106611045 coding downstream 11139 15230288 ~ 15242153 (-)
AMCG00000466 flvcr2,LOC108242486 coding downstream 41421 15187199 ~ 15211871 (-)
AMCG00000458 ttll5 coding downstream 72775 15141396 ~ 15180517 (-)
AMCG00000459 ift43,LOC106590872 coding downstream 144841 15092142 ~ 15108451 (-)
AMCG00000442 NA coding downstream 187921 15042140 ~ 15065371 (-)
AMCG00000465 NA coding upstream 23660 15279489 ~ 15288455 (-)
AMCG00000476 NA coding upstream 42048 15297877 ~ 15309522 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding upstream 55172 15311001 ~ 15320215 (-)
AMCG00000480 NA coding upstream 127828 15383657 ~ 15390950 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding upstream 136040 15391869 ~ 15411274 (-)
G150485 NA non-coding downstream 2463 15250625 ~ 15250829 (-)
G150476 NA non-coding downstream 24000 15228897 ~ 15229292 (-)
G150427 NA non-coding downstream 361586 14890534 ~ 14891706 (-)
G150306 NA non-coding downstream 757632 14495459 ~ 14495660 (-)
G150219 NA non-coding downstream 1099446 14151588 ~ 14153846 (-)
G150502 NA non-coding upstream 5558 15261387 ~ 15263576 (-)
G150504 NA non-coding upstream 15567 15271396 ~ 15273123 (-)
G150497 NA non-coding upstream 20134 15275963 ~ 15278056 (-)
G150514 NA non-coding upstream 38390 15294219 ~ 15295205 (-)
G150581 NA non-coding upstream 310930 15566759 ~ 15568750 (-)
AMCG00000464 batf other downstream 30549 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 115369 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 680860 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 991960 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 1224365 14003076 ~ 14028927 (-)
AMCG00000475 NA other upstream 33474 15289303 ~ 15291255 (-)
AMCG00000482 NA other upstream 206017 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 242343 15498172 ~ 15527390 (-)
G150729 NA other upstream 1549366 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1577930 16833759 ~ 16836603 (-)

Expression


Co-expression Network