Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000472 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 15616963 ~ 15619029 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0016226 | iron-sulfur cluster assembly | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0051537 | 2 iron, 2 sulfur cluster binding | molecular_function |
| GO:0015035 | protein disulfide oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K07390 | grxD, GLRX5; monothiol glutaredoxin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000472 | True | 1134 | mRNA | 0.44 | 2 | 15616963 | 15619029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000481 | NA | coding | downstream | 197393 | 15415530 ~ 15419570 (-) |
| AMCG00000479 | ptpn21,LOC106601406,LOC107560165 | coding | downstream | 205689 | 15391869 ~ 15411274 (-) |
| AMCG00000480 | NA | coding | downstream | 226013 | 15383657 ~ 15390950 (-) |
| AMCG00000477 | ttc8,LOC106611037,LOC106591546 | coding | downstream | 296748 | 15311001 ~ 15320215 (-) |
| AMCG00000476 | NA | coding | downstream | 307441 | 15297877 ~ 15309522 (-) |
| AMCG00000494 | NA | coding | upstream | 634108 | 16253137 ~ 16266313 (-) |
| AMCG00000493 | NA | coding | upstream | 657969 | 16276998 ~ 16278955 (-) |
| AMCG00000487 | bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 | coding | upstream | 1031042 | 16650071 ~ 16659677 (-) |
| AMCG00000488 | NA | coding | upstream | 1068076 | 16687105 ~ 16689646 (-) |
| AMCG00000496 | setd3,LOC100195551 | coding | upstream | 1103145 | 16722174 ~ 16736751 (-) |
| G150586 | NA | non-coding | downstream | 36042 | 15578889 ~ 15580921 (-) |
| G150581 | NA | non-coding | downstream | 48213 | 15566759 ~ 15568750 (-) |
| G150514 | NA | non-coding | downstream | 321758 | 15294219 ~ 15295205 (-) |
| G150497 | NA | non-coding | downstream | 338907 | 15275963 ~ 15278056 (-) |
| G150504 | NA | non-coding | downstream | 343840 | 15271396 ~ 15273123 (-) |
| G150588 | NA | non-coding | upstream | 192 | 15619221 ~ 15619788 (-) |
| G150626 | NA | non-coding | upstream | 137824 | 15756853 ~ 15758160 (-) |
| G150634 | NA | non-coding | upstream | 229006 | 15848035 ~ 15871468 (-) |
| G150661 | NA | non-coding | upstream | 613929 | 16232958 ~ 16233189 (-) |
| G150731 | NA | non-coding | upstream | 1204000 | 16823029 ~ 16840596 (-) |
| AMCG00000469 | LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 | other | downstream | 89573 | 15498172 ~ 15527390 (-) |
| AMCG00000482 | NA | other | downstream | 137914 | 15461846 ~ 15479049 (-) |
| AMCG00000475 | NA | other | downstream | 325708 | 15289303 ~ 15291255 (-) |
| AMCG00000464 | batf | other | downstream | 394220 | 15213402 ~ 15222743 (-) |
| AMCG00000457 | NA | other | downstream | 479040 | 15124025 ~ 15137923 (-) |
| G150729 | NA | other | upstream | 1186166 | 16805195 ~ 16834326 (-) |
| AMCG00000518 | NA | other | upstream | 1214730 | 16833759 ~ 16836603 (-) |
| AMCG00000533 | NA | other | upstream | 1934689 | 17553718 ~ 17578383 (-) |
| AMCG00000529 | NA | other | upstream | 2066536 | 17685565 ~ 17719171 (-) |
| AMCG00000521 | NA | other | upstream | 2257340 | 17876369 ~ 17878350 (-) |
