AMCG00000475


Basic Information

Item Value
gene id AMCG00000475
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15289303 ~ 15291255 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000475
GTGTGGTTCAGATTGACTTAGTCGCCGGCTTGCAAGGGGACAGTTTTTCGCGCAGTGATATTAATCATATATTAGACTGAATTGCCTTCTTTGCAAGTTTTAACAACTGGCTTGGCAATGTCTGATAAAGATCTGATTTCAGTGGATTATGAAGTTTTTGGAAAAGTGCAGGGCGTGTTTTTCCGGAAGTACACTCAgGCTGAAGGAAAGAAGCGGGGCTTGGTAGGCTGGGTGCAGAACACCAAGGACGGGACGGTCCAAGGGCAGCTCCAGGGTCCCAGCAGCAAAGTCAGTGCAATGCAGGAGTGGTTGAGAACCACAGGCAGTCCCAAGTCGCAGATCACTAAAGCAGAGTTCAGGAACGAGAAGACCATTGAAAGCTTGGATCATACAGATTTCAGAGTTATCCGACCTTAACATAGCATGtatcaatttaaatgaaataccaCAATTCAGTTTGTTTGAATGGATGGTCATGTGGTGGCCTGTACTAACTGAAAAAAGGCACATTATCCCTGTTACAacttgaaacattttttttaatgcattgttttccatGTGGGCActtatttcattcattatttattttgtacaaattaAGCTTAACTCAGTAAATTGTTTCAGCTCTCCATTGTAGACATATTTATCACATACTGTCAGTCtctgtttataaataatgttagATATGGCAGCTTTATTATGAGTCAAACTTGAACACATAAACATTaagtttttttctctgttgCTTTTGTGAAAATACAgggtatatataatatatgaaaataatatacattcatATCGGCCTATGTATTGGAAACCTATATGAGCTTTTTAGGTTAGAACTCCATAAGAGACATTAAAGAAAgtgagtatttatttatcaaacattatactataaaaatattataaaataatagttg
>TU189419
AGTCGCCGGCTTGCAAGGGGACAGTTTTTCGCGCAGTGATATTAATCATATATTAGACTGAATTGCCTTCTTTGCAAGTTTTAACAACTGGCTTGGCAATGTCTGATAAAGATCTGATTTCAGTGGATTATGAAGTTTTTGGAAAAGTGCAGGGCGTGTTTTTCCGGAAGTACACTCAgGCTGAAGGAAAGAAGCGGGGCTTGGTAGGCTGGGTGCAGAACACCAAGGACGGGACGGTCCAAGGGCAGCTCCAGGGTCCCAGCAGCAAAGTCAGTGCAATGCAGGAGTGGTTGAGAACCACAGGCAGTCCCAAGTCGCAGATCACTAAAGCAGAGTTCAGGAACGAGAAGACCATTGAAAGCTTGGATCATACAGATTTCAGAGTTATCCGACCTTAACATAGCATGtatcaatttaaatgaaataccaCAATTCAGTTTGTTTGAATGGATGGTCATGTGGTGGCCTGTACTAACTGAAAAAAGGCACATTATCCCTGTTACAacttgaaacattttttttaatgcattgttttccatGTGGGCActtatttcattcattatttattttgtacaaattaAGCTTAACTCAGTAAATTGTTTCAGCTCTCCATTGTAGACATATTTATCACATACTGTCAGTCtctgtttataaataatgttagATATGGCAGCTTTATTATGAGTCAAACTTGAACACATAAACATTaagtttttttctctgttgCTTTTGTGAAAATACAgggtatatataatatatgaaaataatatacattcatATCGGCCTATGTATTGGAAACCTATATGAGCTTTTTAGGTTAGAACTCCATAAGAGACATTAAAGAAAgtgagt

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003998 acylphosphatase activity molecular_function

KEGG:

id description
K01512 acyP; acylphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000475 True 920 mRNA 0.37 3 15289303 15291255
TU189419 False 852 TUCP 0.38 3 15289352 15291236

Neighbor

gene id symbol gene type direction distance location
AMCG00000465 NA coding downstream 848 15279489 ~ 15288455 (-)
AMCG00000467 NA coding downstream 33474 15253292 ~ 15255829 (-)
AMCG00000463 atf3,jdp2,LOC106611045 coding downstream 47150 15230288 ~ 15242153 (-)
AMCG00000466 flvcr2,LOC108242486 coding downstream 77432 15187199 ~ 15211871 (-)
AMCG00000458 ttll5 coding downstream 108786 15141396 ~ 15180517 (-)
AMCG00000476 NA coding upstream 6622 15297877 ~ 15309522 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding upstream 19746 15311001 ~ 15320215 (-)
AMCG00000480 NA coding upstream 92402 15383657 ~ 15390950 (-)
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding upstream 100614 15391869 ~ 15411274 (-)
AMCG00000481 NA coding upstream 124275 15415530 ~ 15419570 (-)
G150497 NA non-coding downstream 11247 15275963 ~ 15278056 (-)
G150504 NA non-coding downstream 16180 15271396 ~ 15273123 (-)
G150502 NA non-coding downstream 25727 15261387 ~ 15263576 (-)
G150485 NA non-coding downstream 38474 15250625 ~ 15250829 (-)
G150476 NA non-coding downstream 60011 15228897 ~ 15229292 (-)
G150514 NA non-coding upstream 2964 15294219 ~ 15295205 (-)
G150581 NA non-coding upstream 275504 15566759 ~ 15568750 (-)
G150586 NA non-coding upstream 287634 15578889 ~ 15580921 (-)
G150588 NA non-coding upstream 327966 15619221 ~ 15619788 (-)
G150626 NA non-coding upstream 465598 15756853 ~ 15758160 (-)
AMCG00000464 batf other downstream 66560 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 151380 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 716871 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 1027971 14245817 ~ 14261332 (-)
AMCG00000409 exoc5 other downstream 1260376 14003076 ~ 14028927 (-)
AMCG00000482 NA other upstream 170591 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 206917 15498172 ~ 15527390 (-)
G150729 NA other upstream 1513940 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1542504 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 2262463 17553718 ~ 17578383 (-)

Expression


Co-expression Network