AMCG00000481


Basic Information

Item Value
gene id AMCG00000481
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15415530 ~ 15419570 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000481
ATGGAGGCGAGAAAAGATAATGACCAAAAGCGAAGGGAACGGATGAGCAAGGAGGTATCCAGGTATGAGAGAGAGGTCCTCTCAGCCCAATCAGCCTCACAGAAGAGCTCAAGAAGTAACAGCAGGCCTCCTTCTGCTGACACCATCCAGAGTAACGCATCCTTGCAAGATAATGGTGATGAGAGTCTTTCCCCTTATCTGCAGAGACAGCTGCTTTCATCTCCCAGATTTGTAACATCTTTCCATTCGAAGCAAACTGCATATCCACCCAGAACCGTCAACATGGCCGAAACCCCCTCAAAGATCTTCTACCGATCCTCTTCAGAATTAAGCTGTAGTCCCGCTAGAAGGGGGCAGCATTCGGCCCGCTCTTCTTATGATTCTTCCAGCAGCCTTTTAAAGTCTCCGAATGTGTACAAGTCTTTTCAGGATCCGAATCAAAAGACGTACAGCGGAGATCTCCTACAAAAGCATTCCTATCACTTTACAGAAGACAAACCTTTCACACCGCGGACGCTGAAAAAAGACACCAAGTCTTTTCTGTCACAGTACAGGTATTACACCCCACCTAGGAGGAAACCTGCAAAAGAAAAGTCCACTTTAATGGTCAATCAGGACACACAAACGGACCATGAAAGCTCCTTTGATAAAGCAGGGTCGCCCCCAGACGAAAGACGTTTAACTCAGGTTATCGACATTAAGGACACAATCTCCGACCATGAGGAAAGTCACGGATGA

Function

GO: NA

KEGG:

id description
K19655 SPATA7; spermatogenesis-associated protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000481 True 738 mRNA 0.47 5 15415530 15419570

Neighbor

gene id symbol gene type direction distance location
AMCG00000479 ptpn21,LOC106601406,LOC107560165 coding downstream 4256 15391869 ~ 15411274 (-)
AMCG00000480 NA coding downstream 24580 15383657 ~ 15390950 (-)
AMCG00000477 ttc8,LOC106611037,LOC106591546 coding downstream 95315 15311001 ~ 15320215 (-)
AMCG00000476 NA coding downstream 106008 15297877 ~ 15309522 (-)
AMCG00000465 NA coding downstream 127075 15279489 ~ 15288455 (-)
AMCG00000472 NA coding upstream 197393 15616963 ~ 15619029 (-)
AMCG00000494 NA coding upstream 833567 16253137 ~ 16266313 (-)
AMCG00000493 NA coding upstream 857428 16276998 ~ 16278955 (-)
AMCG00000487 bcl11ba,bcl11b,LOC107583625,LOC108270293,LOC107680755 coding upstream 1230501 16650071 ~ 16659677 (-)
AMCG00000488 NA coding upstream 1267535 16687105 ~ 16689646 (-)
G150514 NA non-coding downstream 120325 15294219 ~ 15295205 (-)
G150497 NA non-coding downstream 137474 15275963 ~ 15278056 (-)
G150504 NA non-coding downstream 142407 15271396 ~ 15273123 (-)
G150502 NA non-coding downstream 151954 15261387 ~ 15263576 (-)
G150485 NA non-coding downstream 164701 15250625 ~ 15250829 (-)
G150581 NA non-coding upstream 147189 15566759 ~ 15568750 (-)
G150586 NA non-coding upstream 159319 15578889 ~ 15580921 (-)
G150588 NA non-coding upstream 199651 15619221 ~ 15619788 (-)
G150626 NA non-coding upstream 337283 15756853 ~ 15758160 (-)
G150634 NA non-coding upstream 428465 15848035 ~ 15871468 (-)
AMCG00000475 NA other downstream 124275 15289303 ~ 15291255 (-)
AMCG00000464 batf other downstream 192787 15213402 ~ 15222743 (-)
AMCG00000457 NA other downstream 277607 15124025 ~ 15137923 (-)
AMCG00000436 NA other downstream 843098 14569962 ~ 14572432 (-)
AMCG00000425 entpd5,LOC107586906,LOC105908609,LOC106571572,LOC106608092 other downstream 1154198 14245817 ~ 14261332 (-)
AMCG00000482 NA other upstream 42276 15461846 ~ 15479049 (-)
AMCG00000469 LOC108413331,LOC107549545,LOC107582175,LOC108269530,LOC108423442 other upstream 78602 15498172 ~ 15527390 (-)
G150729 NA other upstream 1385625 16805195 ~ 16834326 (-)
AMCG00000518 NA other upstream 1414189 16833759 ~ 16836603 (-)
AMCG00000533 NA other upstream 2134148 17553718 ~ 17578383 (-)

Expression


Co-expression Network